Erwinia carotovora subsp. odorifera subsp. nov., Associated with Odorous Soft Rot of Chicory (Cichorium intybus L.)

Gallois, Annie; Samson, R.; Ageron, Elisabeth; Grimont, Patrick A. D.

doi:10.1099/00207713-42-4-582

Cited by 81 publications

(62 citation statements)

References 8 publications

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“…The strains of P. carotovorum subsp. odoriferum were normally grouped among P. carotovorum, and its taxonomic status will remain unchanged (Gallois et al, 1992).…”

Section: Discussionmentioning

confidence: 99%

“…The use of 22 biochemical and physiological tests confirmed the identity of the bacteria (Gallois et al, 1992) and the repartition in their respective genomic groups, with the exception of two strains: CFBP 5835, received as P. carotovorum subsp. atrosepticum, which was identified as P. carotovorum subsp.…”

Section: Phenotypic Testsmentioning

confidence: 99%

“…For the purposes of identification of E. carotovora subspecies, several studies have yielded reliable phenotypic criteria that differentiate two or more subspecies (Graham, 1972;Thomson et al, 1981;Verdonck et al, 1987;de Boer et al, 1987;Goto & Matsumoto, 1987;Alcorn et al, 1991;Gallois et al, 1992). Serological differentiation using the Ouchterlony double-diffusion method was effective for an E. carotovora subsp.…”

Section: Introductionmentioning

confidence: 99%

“…wasabiae, responsible for internal discoloration of rhizomes of wasabi (Goto & Matsumoto, 1987), and subsp. odorifera, responsible for slimy rot of witloof chicory (Gallois et al, 1992).…”

Section: Introductionmentioning

confidence: 99%

“…carotovorum subsp. odoriferum) (Gallois et al, 1992) were described on the basis of DNA-DNA hybridization. Recently, using amplified fragment length polymorphism (AFLP) fingerprinting, Avrova et al (2002) defined three clusters corresponding to P. carotovorum subspecies: cluster 1 (containing two subclusters, 1a for P. carotovorum subsp.…”

Section: Introductionmentioning

confidence: 99%

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Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. nov. and Pectobacterium wasabiae sp. nov.

Gardan¹,

Gouy²,

Christen

et al. 2003

International Journal of Systematic and Evolutionary Microbiology

307

194

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“…The strains of P. carotovorum subsp. odoriferum were normally grouped among P. carotovorum, and its taxonomic status will remain unchanged (Gallois et al, 1992).…”

Section: Discussionmentioning

confidence: 99%

Section: Phenotypic Testsmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

“…wasabiae, responsible for internal discoloration of rhizomes of wasabi (Goto & Matsumoto, 1987), and subsp. odorifera, responsible for slimy rot of witloof chicory (Gallois et al, 1992).…”

Section: Introductionmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

See 3 more Smart Citations

Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. nov. and Pectobacterium wasabiae sp. nov.

Gardan¹,

Gouy²,

Christen

et al. 2003

International Journal of Systematic and Evolutionary Microbiology

307

194

View full text Add to dashboard Cite

Enterobacter

Grimont¹,

Grimont²

2015

Bergey's Manual of Systematics of Archaea and Bacteria

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En.te.ro.bac' ter . Gr. neut. n. enteron intestine; M.L. masc. n. bacter equivalent of bacterium, a small rod; M.L. masc. n. Enterobacter intestinal small rod. Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Enterobacter Straight rods, 0.6–1.0 × 1.2–3.0 µm, conforming to the general definition of the family Enterobacteriaceae . Motile by peritrichous flagella (generally 4–6). Gram negative. Facultatively anaerobic . Growth occurs readily on ordinary media. Glucose is fermented with production of acid and gas (generally CO 2 :H 2 = 2:1). Gas is not produced from glucose at 44.5°C. Most strains give a positive Voges–Proskauer reaction and a negative methyl red test . An alkaline reaction occurs in Simmons citrate and malonate broth. Nitrate is reduced to nitrite. H 2 S is not produced from thiosulfate. Tetrathionate is not reduced. Corn oil and tributyrin are not hydrolyzed. Gelatin, DNA, and Tween 80 are either not, or very slowly, hydrolyzed . L ‐Arabinose, D ‐cellobiose, D ‐fructose, D ‐galactose, D ‐galacturonate, gentiobiose, D ‐gluconate, D ‐glucosamine, D ‐glucose, D ‐glucuronate, 2‐ketogluconate, L ‐malate, D ‐mannitol, D ‐mannose, D ‐trehalose, and D ‐xylose utilized by all or almost all strains, as sole source of carbon and energy. L ‐rhamnose utilized by all strains except Enterobacter asburiae . L ‐Arabitol, ethanolamine, itaconate, 3‐phenylpropionate, L ‐sorbose, D ‐tartrate, tryptamine, and xylitol are not utilized. meso ‐Erythritol, gentisate, glutarate, and tricarballylate not utilized except by some strains of Enterobacter gergoviae . D ‐melezitose not utilized except by some strains of Enterobacter sakazakii . Optimum temperature for growth is 30°C. Most clinical strains grow at 37°C; some environmental strains give erratic biochemical reactions at 37°C. Widely distributed in nature; common in man and animals. The mol % G + C of the DNA is : 52–60 (Bd). Type species : Enterobacter cloacae (Jordan 1890) Hormaeche and Edwards 1960b72. Nom. Cons. Opin. 28, Jud. Comm. 1963, 38 ( Bacillus cloacae Jordan 1890, 836.)

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Erwinia

Hauben¹,

Swings²

2015

Bergey's Manual of Systematics of Archaea and Bacteria

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Er.wi' ni.a . M.L. fem. n. Erwinia named after Erwin F. Smith. Proteobacteria / Gammaproteobacteria / Enterobacteriales / Enterobacteriaceae / Erwinia Straight rods, 0.5–1.0 × 1.0–3.0 µm; occur singly or in pairs. Gram negative. Motile by peritrichous flagella. Facultatively anaerobic, but anaerobic growth by some species is weak. Optimum temperature, 27–30°C; maximum temperature for growth is 40°C. Oxidase negative. Catalase positive. Pectinase negative . Acid is produced from fructose, D ‐galactose, D ‐glucose, and sucrose but not from adonitol, arabitol, dextrin, dulcitol, inulin, maltose, starch, and tagatose. Utilize fumarate, D ‐galactose, gluconate, D ‐glucose, glycerol, β‐methylglucoside, malate, and succinate, but not L ‐arabitol, benzoate, butanol, methanol, oxalate, propionate, or sorbose as carbon‐ and energy‐yielding sources. Utilize L ‐alanine, L ‐glutaminic acid, glycylglycine, and L ‐serine, but not kynureninic acid and trigonelline, as nitrogen sources. Sensitive to chloramphenicol, furazolidone, nalidixinic acid, oxytetracyline, and tetracycline. Do not possess arginine dihydrolase, caseinase, pectinase, phenylalanine deaminase, or urease. Associated with plants as pathogens, saprophytes, or constituents of the epiphytic flora. The mol % G + C of the DNA is : 49.8–54.1. Type species : Erwinia amylovora (Burrill 1882) Winslow, Broadhurst, Buchanan, Krumwiede, Rogers and Smith 1920, 209 emend. Hauben, Moore, Vauterin, Steenackers, Mergaert, Verdonck and Swings 1999a, 1 ( Micrococcus amylovorus Burrill 1882, 134.)

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Erwinia carotovora subsp. odorifera subsp. nov., Associated with Odorous Soft Rot of Chicory (Cichorium intybus L.)

Cited by 81 publications

References 8 publications

Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. nov. and Pectobacterium wasabiae sp. nov.

Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. nov. and Pectobacterium wasabiae sp. nov.

Enterobacter

Erwinia

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