The synthesis of both cytoplasmic and nuclear proteins has been studied as quiescent, serum-deprived Swiss mouse 3T3 cells are stimulated to transit the cell cycle. In serum-arrested cells a 200,000 dalton cytoplasmic protein and a 51,000 dalton nuclear protein were found to be preferentially synthesized. In serum-stimulated cells the first major protein whose synthesis was seen to increase had a molecular mass of 42,000 daltons. This protein also showed the greatest change in synthesis during the transit from Go to S phase. Its synthesis rose to a maximum 4-6 hr after stimulation and then declined as cells entered S phase. The protein was present in both nuclear and cytoplasmic extracts. It was identified as actin on the basis of its mobility on sodium dodecyl sulfate and isoelectric focusing polyacrylamide gels. Other proteins synthesized preferentially by stimulated cells had molecular masses of 57,000 daltons (cytoplasmic), 33,000 daltons (cytoplasmic and nuclear), and 15,000 daltons (nuclear). The synthesis of the 57,000 and 33,000 dalton proteins increased gradually after stimulation and remainec high during S phase. The 15,000 dalton proteins began to be synthesized as cells entered S phase. The preferential synthesis of these proteins provides biochemical markers for the transition from quiescence to proliferation.Changes in biochemical properties during progression of the cell cycle have been widely described (1-3). However, the detection of marker proteins specific for different phases of the cell cycle is sorely lacking. Such markers would greatly facilitate more detailed analysis of biochemical events associated with the cell cycle.Crucial X 15 mm culture dishes in 25 ml of medium. On the following day the cultures were shifted into medium containing 0.5% serum and the cells were allowed to grow in this medium for [38][39][40][41][42][43][44][45][46][47][48] hr. Cells were stimulated to transit from Go to S by replacing the 0.5% serum medium with medium containing 20% serum. In order to monitor the entry of cells into S, cells were plated in 150-mm culture dishes containing coverslips and arrested in Go by serum deprivation as described above.[3H]-Thymidine at 0.5 ,uCi/ml (1 Ci = 3.7 X 1010 becquerels) was then included in the 20% serum medium used to stimulate the Go to S transit. Coverslips were processed for autoradiography (12) at the indicated times.Cultures were labeled for 2-hr periods with [3H]isoleucine (105 Ci/mmol; 20 or 40 ,uCi/ml) or ['4C]isoleucine (296 mCi/ mmol; 5 ,Ci/ml) in medium containing 1% (1 mg/liter) of the normal Dulbecco's medium isoleucine concentration. The cultures were then washed three times with cold phosphatebuffered saline and the cells were scraped off the plate with a rubber policeman. Cells were fractionated into cytoplasmic and nuclear fractions by using the method of Becker and Stanners (13). The nuclei were pelleted by a 2-min centrifugation at 600 X g. The supernatant was centrifuged at 250,000 X g for 30 min in a Beckman L5-65 ultracentrifuge (SW 50....