2004
DOI: 10.1016/j.febslet.2004.04.043
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Effectiveness of RNA interference in transgenic plants

Abstract: RNA interference (RNAi) can be used to study gene function by effecting degradation of the targeted transcript. However, the effectiveness of transgene-induced RNAi among multiple target genes has not been compared systematically. To this end, we developed a relative quantitative RT-PCR protocol that allows use of a single internal standard over a wide range of target gene expression levels. Using this method in an analysis of transgenic Arabidopsis thaliana RNAi lines targeting 25 different endogenes revealed… Show more

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Cited by 194 publications
(119 citation statements)
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“…The resulting 339 bp PCR product was cloned into a plasmid vector and sequenced. Subsequently, the fragment was directionally cloned at Bam HI and Xba I sites into the expression vector pFGC5941 [9]. This is a dsRNA (hairpin) vector which in this case was used to express only the AV2 gene in the antisense orientation.…”
Section: Resultsmentioning
confidence: 99%
“…The resulting 339 bp PCR product was cloned into a plasmid vector and sequenced. Subsequently, the fragment was directionally cloned at Bam HI and Xba I sites into the expression vector pFGC5941 [9]. This is a dsRNA (hairpin) vector which in this case was used to express only the AV2 gene in the antisense orientation.…”
Section: Resultsmentioning
confidence: 99%
“…The GFP ORF was ampliWed from U70495 (Davis and Vierstra 1998) using the primers GFPorfFXba and GFPorfnsKpn. The RAP2.4 deletion fragments were ligated to the 3Ј end of the GFP coding region and the resulting fragments cloned between the CaMV35S promoter and Tnos in the vector pFGC5941 (Kerschen et al 2004). The resulting plasmids were introduced into Agrobacterium tumefaciens strain GV3101.…”
Section: Subcellular Localisation Of Gfp-rap24 Fusion Proteinsmentioning
confidence: 99%
“…Restriction sites included in the forward and reverse primers, respectively, were used to clone the genes between the CauliXower Mosaic Virus (CaMV) 35S promoter and the nopaline synthase terminator (Tnos). The resulting expression cassettes [CaMV35S-RAP2.4B (or RAP2.4)-Tnos] were excised from pROK2 and recloned into pFGC5941 (Kerschen et al 2004), which contains the bar gene, conferring tolerance to the herbicide phosphinothricin.…”
Section: Construction Of Promoter-gus Fusions and Overexpression Plasmentioning
confidence: 99%
“…An RNAi-based silencing construct was produced using the first 200 nucleotides of the GFP gene [38]. The gene fragment was first cloned in the RNAi vector pFGC5941 [39,40] and then the expression cassette was sub-cloned into pGreen0029 at EcoRI and HindIII restriction sites. All binary vector constructs were finally transformed into Agrobacterium tumefaciens strain GV3101.…”
Section: Production Of Gene Expression Constructsmentioning
confidence: 99%