The mammalian testis determining factor SRY and its related Sox factors are critical developmental regulators. They share significant similarity in their high mobility group (HMG) domain and display discrete patterns of tissue-specific expression. Here we show that SRY and the Sox protein SOX6 colocalize with splicing factors in the nucleus and are dynamically redistributed following the blockage of splicing in living cells. Anti-SOX6 antibodies supershift the spliceosomal complex from assembled splicing reactions and inhibit splicing in vitro of multiple pre-mRNA substrates. Most importantly, SOX6-depleted nuclear extracts have impaired splicing activity, which is efficiently restored by addition of the recombinant SOX6 HMG domain and also by recombinant SRY and the SOX9 HMG domain. These results reveal an unexpected biological function of the SRY, SOX6, and SOX9 gene products and provide a functional link to the biochemical mechanisms operating in mammalian sex determination and in other developmental processes regulated by Sox genes.T he high mobility group (HMG)-type DNA binding domain was originally described as a domain in the RNA polymerase I transcription factor hUBF homologous to two regions in the chromatin HMG protein 1 (1). Proteins containing HMG domains have been found in a large variety of species and are grouped into two families, based on evolutionary and functional conservation (reviewed in ref.2). One family comprises the chromosomal HMG domain group of proteins, which are provided with two or more HMG domains and bind DNA with low to moderate affinity and little sequence specificity. The other family includes sequence-specific transcription factors, which are provided with only one HMG domain and bind to DNA sequences in the promoter of target genes to elicit their transcriptional activation. HMG domain factors bind DNA in the minor groove, induce a relevant DNA bending on binding, and are capable of binding to special or distorted DNA structures, such as four-way junctions, cis-platinum adducts, and base bulges (reviewed in ref.3). Given these properties, HMG domain proteins are postulated to act as architectural elements, promoting formation of contacts between factors bound at distant sites on DNA or recruiting proteins that by themselves do not bind to DNA and facilitating the assembly of higher-order complexes involved in transcriptional control, gene recombination, and DNA repair.Among sequence-specific HMG-domain proteins, a distinct position is occupied by the Sox (SRY box) protein family. A common feature of these proteins is to share more than 50% similarity in their HMG domains to SRY, the testis-determining factor located on human and mouse Y chromosomes. Sox proteins have been identified in a number of vertebrates and invertebrates, including Drosophila melanogaster and Caenorhabditis elegans. Outside the HMG box, Sox proteins are poorly conserved, and many are expressed with a tissue-specific pattern. These factors play a crucial role in development, as also shown by their invol...