We evaluated the Lyra Direct HSV 1؉2/VZV multiplex real-time PCR assay for the detection and differentiation of herpes simplex virus 1 (HSV-1), HSV-2, and varicella-zoster virus (VZV) on 695 consecutive cutaneous and mucocutaneous lesion specimens. The intra-assay and interassay coefficient of variation values for the Lyra assay were 0.29 to 1.30% and 2.33 to 2.61%, respectively. The sensitivities, specificities, and positive and negative predictive values were 93.4 to 95.0%, 96.1 to 96.8%, 78.0 to 80.3%, and 99.0 to 99.1%, respectively, in comparison to those of viral culture. The values were further improved when a resolution analysis was performed with a laboratory-developed PCR assay.
Herpes simplex virus 1 and 2 (HSV-1 and HSV-2, respectively) and varicella-zoster virus (VZV) cause serious cutaneous and mucocutaneous lesions at every stage in immunocompromised patients (1). Due to the similarities in the clinical presentations of infections caused by these three herpesviruses, a clinical diagnosis needs to be confirmed by laboratory testing to prevent misdiagnosis (2). The need for accurate and specific laboratory diagnostics is especially important in immunocompromised patients who may present with atypical lesions confounding the clinical diagnosis and delaying the institution of appropriate antiviral therapy (1, 3, 4). Consequently, etiologic diagnosis and differentiation of HSV-1, HSV-2, and VZV infections is critical for both patient care and infection control (3, 4).Traditional laboratory methods for the diagnosis of cutaneous and mucocutaneous HSV-1, HSV-2, and VZV infections include the Tzanck smear, direct fluorescent assay (DFA), and cell culture (including shell vial culture) (3). Several reports have been published on the increased sensitivity of real-time PCR assays for detecting HSV/VZV over the traditional methods described above (5-7). Most published molecular assays utilize separate reactions for either HSV or VZV, and limited multiplex formats for the simultaneous detection and differentiation of HSV-1, HSV-2, and VZV have been reported (7-9). Currently, four molecular assays have been cleared by the Food and Drug Administration (FDA) for the detection and/or typing of HSV-1 and HSV-2 in genital and/or oral lesions: the MultiCode HSV-1&2 assay (Luminex Corporation, Austin, TX), the ProbeTec HSV QX amplified DNA assay (BD Diagnostics, Sparks, MD), the IsoAmp HSV assay (BioHelix Corporation, Beverly, MA), and the AmpliVue HSV 1ϩ2 assay (Quidel Corporation, San Diego, CA) (10).(This study was presented in part at the 114th Annual Meeting of the American Society for Microbiology, Boston, MA, 17 to 20 May 2014.)In May 2014, the FDA cleared the Lyra Direct HSV 1ϩ2/VZV assay (Quidel Corporation, San Diego, CA). This is the first FDAcleared commercial multiplex real-time PCR assay that simultaneously detects and differentiates HSV-1/2 and VZV DNA in both cutaneous and mucocutaneous lesion specimens. The objectives of this preclinical study were to validate the performance of the Lyra assay on cuta...