Description of Erythrobacter mangrovi sp. nov., an aerobic bacterium from rhizosphere soil of mangrove plant (Kandelia candel)

Ye, Yanghui; Anwar, Nusratgul; Xamxidin, Maripat; Zhang, Ran; Yan, Cen; Nie, Yan-Fang; Zhao, Zhe; Sun, Cong; Wu, Min

doi:10.1007/s10482-020-01451-0

Cited by 10 publications

(3 citation statements)

References 45 publications

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“…Unexpectedly, the genes encoding nitrite reductase were found only in strain “ Erythrobacter mangrovi ” EB310 T . These analyses suggested that bacteria of the genus Qipengyuania may prefer ammonium as a nitrogen source, although a few bacteria could utilize nitrate ( 41 ) and nitrite ( 12 ).…”

Section: Resultsmentioning

confidence: 99%

“…Bacteria of the genus Qipengyuania have frequently been isolated from various habitats. The type strain of the type species Q. sediminis was obtained from a subterrestrial sediment of Qiangtang Basin in Qinghai-Tibetan plateau, People’s Republic of China ( 2 ); other type strains were isolated from marine environments, such as seawater ( 6 , 7 ), estuary water ( 8 ), intertidal and deep-sea sediments ( 9 , 10 ), starfish ( 11 ), and mangrove soil ( 5 , 12 ). These results showed that the genus Qipengyuania may be worldwide spread in coastal environments, like many other taxa, for example the Roseobacter lineage ( 13 ).…”

Section: Introductionmentioning

confidence: 99%

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Comparative Genomics Reveals Genetic Diversity and Metabolic Potentials of the Genus Qipengyuania and Suggests Fifteen Novel Species

Liu

Pei

et al. 2022

Microbiol Spectr

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The deciphering of the phylogenetic diversity and metabolic features of the abundant bacterial taxa is critical for exploring their ecological importance and application potential. Qipengyuania is a genus of frequently isolated heterotrophic microorganisms with great industrial application potential. Numerous strains related to the genus Qipengyuania have been isolated from diverse environments, but their genomic diversity and metabolic functions remain unclear.

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Section: Resultsmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

Comparative Genomics Reveals Genetic Diversity and Metabolic Potentials of the Genus Qipengyuania and Suggests Fifteen Novel Species

Liu

Pei

et al. 2022

Microbiol Spectr

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“…They show increased abundance when coastal areas undergo sudden vegetation declines that can arise through land use change [104], with further investigation of this genus it may be possible to identify indicator species that can be used in the design of pro-active management strategies. Erythrobacter (here, enriched in pneumatophores) have been isolated from mangrove habitats in multiple studies throughout the world [84,[105][106][107], but little is known about what they are doing in these habitats. Like the Altererythrobacter, the ubiquity of Erythrobacter in multiple mangrove forests suggests that they play an important role in the mangrove microbiome, and again this genus would be a worthy candidate for future studies trying to determine whether beneficial mangrove microbes exist.…”

Section: Discussionmentioning

confidence: 99%

The Mangrove Microbiome of the Malay Peninsula

Wainwright

Hickman

Millar

et al. 2022

Preprint

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Microbes have fundamental roles underpinning the functioning of our planet, they are involved in global carbon and nutrient cycling, and support the existence of multicellular life. The mangrove ecosystem is nutrient limited and without microbial cycling, life in this harsh environment would likely not exist. The mangroves of Southeast Asia are the oldest and most biodiverse of all the planets. They have vital roles helping to prevent shoreline erosion, act as nursery grounds for many marine species and contain significant stocks of sequestered carbon. Despite these recognised benefits and the importance of microbes in these ecosystems, studies examining the mangrove microbiome are scarce, especially in the Southeast Asian biodiversity hotspot. Here we examine the microbiome of Avicenia alba and Sonneratia alba and identify a core microbiome of 81 taxa, a further eight taxa (Pleurocapsa, Tunicatimonas, Halomonas, Marinomonas, Rubrivirga, Altererythrobacte, Lewinella, and Erythrobacter) were found to be differentially abundant suggesting key roles in this microbiome, with the identified dimethylsulfoniopropionate (DMSP) metabolisers having important functions in these habitats. The majority of those identified are involved in nutrient cycling or involved in the production of compounds that promote host survival. Increasingly, blue carbon and nature-based solutions to climate change are heralded as viable mitigation steps to limit climate change, however, this is done with little to no consideration of the microbial communities that cycle sequestered carbon in these environments. Here, we examine the microbial communities present in sediment samples taken in close proximity to each tree, sediment samples represent a major sink of atmospheric carbon and understanding how the associated communities will change as climate change advances will become an increasingly important part of carbon stock assessments. Knowing what microbes are presently there is an important first step in this process.

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