We study stochastic dynamical systems in settings where only partial statistical information about the noise is available, e.g., in the form of a limited number of noise realizations. Such systems are particularly challenging to analyze and control, primarily due to an absence of a distributional uncertainty model which: (1) is expressive enough to capture practically relevant scenarios; (2) can be easily propagated through system maps; (3) is closed under propagation; and (4) allows for computationally tractable control actions. In this paper, we propose to model distributional uncertainty via Optimal Transport ambiguity sets and show that such modeling choice satisfies all of the above requirements. We then specialize our results to stochastic LTI systems, and start by showing that the distributional uncertainty can be efficiently captured, with high probability, within an Optimal Transport ambiguity set on the space of noise trajectories. Then, we show that such ambiguity sets propagate exactly through the system dynamics, giving rise to stochastic tubes that contain, with high probability, all trajectories of the stochastic system. Finally, we show that the control task is very interpretable, unveiling an interesting decomposition between the roles of the feedforward and the feedback control terms. Our results are actionable and successfully applied in stochastic reachability analysis and in trajectory planning under distributional uncertainty.