“…Microbes interact with their hosts and their communities, and these interactions have been implicated in numerous human health conditions including obesity and metabolic syndrome (Ley et al, 2005;Turnbaugh et al, 2009;Vrieze et al, 2012;Ridaura et al, 2013), cardiovascular disease (Wang et al, 2011), Clostridium difficile colitis (Gough et al, 2011), inflammatory bowel diseases (Gevers et al, 2014) and HIV (Lozupone et al, 2013a). These communities are influenced by diet, culture, geography, age and antibiotic use, among other factors (Lozupone et al, 2013b), and are also very important in other systems, such as soils, lakes and oceans (Chaffron et al, 2010;Beman et al, 2011;Steele et al, 2011).…”