Construction and application of carbohydrate microarrays to detect foodborne bacteria

Hu, Jing; Xiao, Yong; Shao, Shu-An; Gu, Rui; Shi, Qimin; Z, Liu; Yin, Jian

doi:10.1016/s1875-5364(20)30024-8

Cited by 3 publications

(6 citation statements)

References 41 publications

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“…With the advancement of robotic array spotting systems, several thousands of spots can be achieved simultaneously. Several DNA microarrays [ 52 , 53 , 54 , 55 , 56 , 57 , 58 , 59 ], glycan microarrays [ 60 , 61 , 62 , 63 , 64 ], peptide microarrays [ 65 , 66 ], and protein microarrays [ 36 , 67 , 68 , 69 , 70 ] are fabricated using commercially available instruments, e.g., Smart Arrayer, OmniGrid contact microarrayer, Gene chip, Bio odyssey, BioRobotics MicroGRID II microarray printer, etc.…”

Section: Microarray Fabrication Biomolecule Immobilization and Detect...mentioning

confidence: 99%

“…The second step involved a thiol–maleimide reaction [ 126 ], where the thiol group of DNA reacted with a maleimide group present on the glass slide. Jing et al [ 61 ] synthesized maleimide-functionalized carbohydrates and immobilized them on thiol-coated glass slides to fabricate a carbohydrate microarray.…”

Section: Microarray Fabrication Biomolecule Immobilization and Detect...mentioning

confidence: 99%

“…The use of fluorescent dyes (Cy3, Cy5, FITC, Alexa fluor 647, Alexa fluor 555, and Alexa fluor 488), radioisotopes ( 32 P, 33 P, and 14 C), near-infrared dyes (phthalocyanine dyes, polymethine carbocyanine dyes, IRDye 800CW, IRDye 750, and IRDye 800), and enzymes (horseradish peroxidase) falls under the category of label-dependent. Importantly, fluorescent dyes (Cy3 label, Cy5,FITC, Alexa flour 647, Alexa fluor 555, Alexa 488, CF555 or CF647, DyLight ® 650, DyLight ® 550 [ 69 ], and Green 540 [ 95 ]) were preferred in most of the microarray articles [ 46 , 49 , 54 , 56 , 57 , 58 , 61 , 65 , 71 , 72 , 73 , 77 , 82 , 83 , 84 , 93 , 97 , 134 , 135 , 136 ]. The reason for this could be their ease of availability, the established protocol to conjugate the dyes, their use for designing a multiplex assay, and the commercially available screening instrumentation (confocal microscope, LuxScan 10K, and GenePix pro 6).…”

Section: Microarray Fabrication Biomolecule Immobilization and Detect...mentioning

confidence: 99%

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Recent Progress in Development and Application of DNA, Protein, Peptide, Glycan, Antibody, and Aptamer Microarrays

Tetala

2023

Biomolecules

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Microarrays are one of the trailblazing technologies of the last two decades and have displayed their importance in all the associated fields of biology. They are widely explored to screen, identify, and gain insights on the characteristics traits of biomolecules (individually or in complex solutions). A wide variety of biomolecule-based microarrays (DNA microarrays, protein microarrays, glycan microarrays, antibody microarrays, peptide microarrays, and aptamer microarrays) are either commercially available or fabricated in-house by researchers to explore diverse substrates, surface coating, immobilization techniques, and detection strategies. The aim of this review is to explore the development of biomolecule-based microarray applications since 2018 onwards. Here, we have covered a different array of printing strategies, substrate surface modification, biomolecule immobilization strategies, detection techniques, and biomolecule-based microarray applications. The period of 2018–2022 focused on using biomolecule-based microarrays for the identification of biomarkers, detection of viruses, differentiation of multiple pathogens, etc. A few potential future applications of microarrays could be for personalized medicine, vaccine candidate screening, toxin screening, pathogen identification, and posttranslational modifications.

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Section: Microarray Fabrication Biomolecule Immobilization and Detect...mentioning

confidence: 99%

Section: Microarray Fabrication Biomolecule Immobilization and Detect...mentioning

confidence: 99%

Section: Microarray Fabrication Biomolecule Immobilization and Detect...mentioning

confidence: 99%

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Recent Progress in Development and Application of DNA, Protein, Peptide, Glycan, Antibody, and Aptamer Microarrays

Tetala

2023

Biomolecules

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“…Carbohydrates are an essential type of macromolecules that are ubiquitously found throughout living organisms, playing vital roles in numerous biological recognition processes associated with cell differentiation, development, adhesion, communication, and signaling [84]. In the context of infectious diseases, many pathogenic microorganisms attach onto the surface of host cells through carbohydrate-protein interactions between cell-surface glycans and adhesins or agglutinins.…”

Section: Carbohydratesmentioning

confidence: 99%

“…In the context of infectious diseases, many pathogenic microorganisms attach onto the surface of host cells through carbohydrate-protein interactions between cell-surface glycans and adhesins or agglutinins. Bacteria, viruses, and fungi express onto their surface a vast number of glycan-binding proteins, which are also known as lectins [84][85][86].…”

Section: Carbohydratesmentioning

confidence: 99%

Polymeric Nanoparticles for Antimicrobial Therapies: An up-to-date Overview

et al. 2021

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Despite the many advancements in the pharmaceutical and medical fields and the development of numerous antimicrobial drugs aimed to suppress and destroy pathogenic microorganisms, infectious diseases still represent a major health threat affecting millions of lives daily. In addition to the limitations of antimicrobial drugs associated with low transportation rate, water solubility, oral bioavailability and stability, inefficient drug targeting, considerable toxicity, and limited patient compliance, the major cause for their inefficiency is the antimicrobial resistance of microorganisms. In this context, the risk of a pre-antibiotic era is a real possibility. For this reason, the research focus has shifted toward the discovery and development of novel and alternative antimicrobial agents that could overcome the challenges associated with conventional drugs. Nanotechnology is a possible alternative, as there is significant evidence of the broad-spectrum antimicrobial activity of nanomaterials and nanoparticles in particular. Moreover, owing to their considerable advantages regarding their efficient cargo dissolving, entrapment, encapsulation, or surface attachment, the possibility of forming antimicrobial groups for specific targeting and destruction, biocompatibility and biodegradability, low toxicity, and synergistic therapy, polymeric nanoparticles have received considerable attention as potential antimicrobial drug delivery agents. In this context, the aim of this paper is to provide an up-to-date overview of the most recent studies investigating polymeric nanoparticles designed for antimicrobial therapies, describing both their targeting strategies and their effects.

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Conventional and advanced detection techniques of foodborne pathogens: A comprehensive review

Kabiraz¹,

Majumdar²,

Mahmud³

et al. 2023

Heliyon

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Construction and application of carbohydrate microarrays to detect foodborne bacteria

Cited by 3 publications

References 41 publications

Recent Progress in Development and Application of DNA, Protein, Peptide, Glycan, Antibody, and Aptamer Microarrays

Recent Progress in Development and Application of DNA, Protein, Peptide, Glycan, Antibody, and Aptamer Microarrays

Polymeric Nanoparticles for Antimicrobial Therapies: An up-to-date Overview

Conventional and advanced detection techniques of foodborne pathogens: A comprehensive review

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