A high‐throughput composite catalyst is prepared from porous carbon with an unconventional nanocube morphology decorated with nickel nanoparticles. Owing to the advantageous properties of the designed carbon support, the composite combines a high surface area and a hierarchical pore structure with high functionality. Furthermore, the regularly shaped nanocubes allow for a good packing of a fixed‐bed flow reactor, in which the internal transport pores cannot be blocked and stay open for efficient column performance. The composite is employed as a catalyst in the hydrogenation of 5‐hydroxymethylfurfural (HMF) to 2,5‐dimethylfuran (DMF), showing good catalytic performance and overcoming the conventional problem of column blocking.