2020
DOI: 10.1016/j.kint.2020.05.029
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Common risk variants in NPHS1 and TNFSF15 are associated with childhood steroid-sensitive nephrotic syndrome

Abstract: To understand the genetics of steroid-sensitive nephrotic syndrome (SSNS), we conducted a genome-wide association study in 987 childhood SSNS patients and 3,206 healthy controls with Japanese ancestry. Beyond known associations in the HLA-DR/DQ region, common variants in NPHS1-KIRREL2 (rs56117924, P[4.94E-20, odds ratio (OR) [1.90)

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Cited by 42 publications
(55 citation statements)
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“…There are also two GWAS in Japanese SSNS patients (224 vs 419 controls and 987 cases vs 3206 controls, respectively) confirming the association with HLA-DR/DQ is important in a different ethnicity [9,10].…”
Section: The Role Of Hla In Ssnsmentioning
confidence: 77%
See 2 more Smart Citations
“…There are also two GWAS in Japanese SSNS patients (224 vs 419 controls and 987 cases vs 3206 controls, respectively) confirming the association with HLA-DR/DQ is important in a different ethnicity [9,10].…”
Section: The Role Of Hla In Ssnsmentioning
confidence: 77%
“…Remarkably, in both Japanese cohorts studied [9,10], the common risk haplotype of the European and South Asian population (HLA-DQA1*02:01; HLA-DRB1*07:01; HLA-DQB1*02) was not replicated. The haplotype associated with the strongest risk for disease was HLA-DRB1*08:02, DQB1*03:02, and the haplotype with the strongest protective association was HLA-DRB1*13:02, DQB1*06:04 [9].…”
Section: The Role Of Hla In Ssnsmentioning
confidence: 90%
See 1 more Smart Citation
“…Given that NPHS1 encodes the immunoglobulin superfamily protein, nephrin, expressed on glomerular epithelial cells (i.e., podocytes), this landmark study led to a substantial increase in our understanding of podocyte involvement in the development of massive proteinuria observed in NS. Interestingly enough, a recent genome‐wide study with 987 childhood SSNS patients and 3,206 healthy controls with Japanese ancestry demonstrated that common variants in NPHS1‐KIRREL2 (rs56117924) and TNFSF15 (rs6478109) regions achieved genome‐wide significance and that trans‐ethnic meta‐analyses including Japanese, Korean, South Asian, African, European, Hispanic and Maghrebian populations confirmed the significant associations of variants in NPHS1‐KIRREL2 and TNFSF15 loci 26 . Furthermore, analysis of the NPHS1 risk alleles with glomerular NPHS1 mRNA expression from the same person revealed allele‐specific expression with significantly lower expression of the transcript derived from the risk haplotype.…”
Section: Involvement Of Podocytes In the Development Of Proteinuria And Their Association With Regulatory T Lymphocytesmentioning
confidence: 98%
“…There is suggestion that MCD may lead to FSGS in treatment resistant patients and at times it may be difficult to adequately obtain a kidney biopsy sample that reflects the progression of MCD toward FSGS (due to potential biopsy sampling error) (1). Recent evidence from genetic association studies suggests that genetic variation in the adaptive immune response coupled with environmental factors may be very important risk factors for development of MCD (7)(8)(9)(10). The animal model that most closely resembles MCD is the puromycin aminonucleoside nephrosis (PAN) in rats, which leads to the production of reactive oxygen species and direct DNA damage.…”
Section: Introductionmentioning
confidence: 99%