2019
DOI: 10.1007/s10916-019-1172-1
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Cluster Analysis of Obesity Disease Based on Comorbidities Extracted from Clinical Notes

Abstract: Clinical notes provide a comprehensive and overall impression of the patient's health. However, the automatic extraction of information within these notes is challenging due to their narrative style. In this context, our goal was to identify clusters of patients based on fourteen comorbidities related to obesity, automatically extracted with the cTAKES tool from the i2b2 Obesity Challenge data. Furthermore, results were compared with clusters obtained from experts' annotated data. The sparse K-means algorithms… Show more

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Cited by 14 publications
(7 citation statements)
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“…In contrast to the lack of clusters in our motor FND group of patients, previous high-quality studies using the same methodology (gap statistics) reported homogeneous clusters including drug-naive parkinsonism (Jain, Park, & Comer, 2015), comorbidities associated with obesity (Reategui, Ratte, Bautista-Valarezo, & Duque, 2019), breast cancer progression data (Alexe, Dalgin, Ganesan, Delisi, & Bhanot, 2007). However, most cluster analysis studies in neurological conditions with motor symptoms such as Parkinson's disease (Ba, Obaid, Wieler, Camicioli, & Martin, 2016; Mu et al, 2017; Yang, Kim, Yun, Kim, & Jeon, 2014) or fibromyalgia (Yim et al, 2017) suffered from important methodological problems which could have led to false-positive cluster identification.…”
Section: Cluster Analysiscontrasting
confidence: 79%
“…In contrast to the lack of clusters in our motor FND group of patients, previous high-quality studies using the same methodology (gap statistics) reported homogeneous clusters including drug-naive parkinsonism (Jain, Park, & Comer, 2015), comorbidities associated with obesity (Reategui, Ratte, Bautista-Valarezo, & Duque, 2019), breast cancer progression data (Alexe, Dalgin, Ganesan, Delisi, & Bhanot, 2007). However, most cluster analysis studies in neurological conditions with motor symptoms such as Parkinson's disease (Ba, Obaid, Wieler, Camicioli, & Martin, 2016; Mu et al, 2017; Yang, Kim, Yun, Kim, & Jeon, 2014) or fibromyalgia (Yim et al, 2017) suffered from important methodological problems which could have led to false-positive cluster identification.…”
Section: Cluster Analysiscontrasting
confidence: 79%
“…With an increase in income and quality of life, the rate of obesity in the middle-aged population is higher than that in the elderly population (age > 65 years) 23 . Although the obese patients are young, they have multiple the obesity-related comorbidities such as metabolic syndrome and CAD 2 . The adverse effects of obesity on cardiovascular haemodynamics, structure, impaired systolic and/or diastolic ventricular function, and increased risk of cardiac failure have been widely reported 24 , 25 .…”
Section: Discussionmentioning
confidence: 99%
“…In 2011, the World Health Organization (WHO) reported a significant increase in the prevalence of obesity in the United States; 62% of the adult population was categorised as overweight, including 26% obese adults 1 . Obesity is correlated with several comorbidities, such as metabolic syndrome, coronary artery disease (CAD), neoplasm, musculoskeletal disorders, and idiopathic sudden cardiac arrest (SCA) 2 , 3 . Obese patients account for 300,000 SCA cases in the United States annually 3 .…”
Section: Introductionmentioning
confidence: 99%
“…Here, similar participants were clustered together by running an initial pre-clustering followed by a hierarchical clustering method. In another study on patients with obesity, three types of clusters were identified based on the number of comorbidities and the percentage of patients suffering from them [8]. A sparse k-means algorithm was also used at two-levels to identify subgroups among the groups of individuals based on 14 comorbidities related to obesity and contrasted them against experts' annotations [8].…”
Section: B Patient Subtypingmentioning
confidence: 99%