Among various man-made ecosystems, compost is an interesting example which presents a complete spectrum that harbor multitude of microbial diversity since it is a result of degradation of agro-residues. The microbial abundance, composition and activity change substantially during the composting process. The succession of microbial communities during composting is a classical example of how the growth and activity of one group of organisms can create conditions necessary for the growth of others. Several generations of microorganisms succeed each other during composting where microbial flora utilizes the available material in the substrate as also the cellular components of its predecessors for growth. Community structure and diversity are instrumental in manipulating compost environment in order to increase compost process and to improve compost quality.