Burkholderia pseudomultivorans sp. nov., a novel Burkholderia cepacia complex species from human respiratory samples and the rhizosphere

Peeters, Charlotte; Zlosnik, James E. A.; Spilker, Theodore; Hird, Trevor J.; LiPuma, John J.; Vandamme, Peter

doi:10.1016/j.syapm.2013.06.003

Cited by 118 publications

(71 citation statements)

References 30 publications

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“…39 Adding this species to the CFFPR will alter the epidemiology of other common Burkholderia species (J. J. LiPuma, MD, unpublished data, October 2013). Among 341 isolates identified as A xylosoxidans, only 42% were confirmed as such, while 24% were identified as A ruhlandii and 17% as A dolans.…”

Section: Discussionmentioning

confidence: 99%

Changing Epidemiology of the Respiratory Bacteriology of Patients With Cystic Fibrosis

Salsgiver

Fink

Knapp

et al. 2016

Chest

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199

166

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Section: Discussionmentioning

confidence: 99%

Changing Epidemiology of the Respiratory Bacteriology of Patients With Cystic Fibrosis

Salsgiver

Fink

Knapp

et al. 2016

Chest

Self Cite

199

166

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“…[69][70][71][72][73][74][75][76][77][78][79][80] The frequency of detection of these species in people with CF varies considerably, although Burkholderia cenocepacia and Burkholderia multivorans are most common. 26,81 Burkholderia gladioli is the third most frequently isolated Burkholderia species among CF patients in the United States.…”

Section: Ic2 Burkholderia Sppmentioning

confidence: 99%

Infection Prevention and Control Guideline for Cystic Fibrosis: 2013 Update

Saiman

Siegel

LiPuma

et al. 2014

Infect. Control Hosp. Epidemiol.

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345

382

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The 2013 Infection Prevention and Control (IP&C) Guideline for Cystic Fibrosis (CF) was commissioned by the CF Foundation as an update of the 2003 Infection Control Guideline for CF. During the past decade, new knowledge and new challenges provided the following rationale to develop updated IP&C strategies for this unique population:1. The need to integrate relevant recommendations from evidence-based guidelines published since 2003 into IP&C practices for CF. These included guidelines from the Centers for Disease Control and Prevention (CDC)/Healthcare Infection Control Practices Advisory Committee (HICPAC), the World Health Organization (WHO), and key professional societies, including the Infectious Diseases Society of America (IDSA) and the Society for Healthcare Epidemiology of America (SHEA). During the past decade, new evidence has led to a renewed emphasis on source containment of potential pathogens and the role played by the contaminated healthcare environment in the transmission of infectious agents. Furthermore, an increased understanding of the importance of the application of implementation science, monitoring adherence, and feedback principles has been shown to increase the effectiveness of IP&C guideline recommendations.2. Experience with emerging pathogens in the non-CF population has expanded our understanding of droplet transmission of respiratory pathogens and can inform IP&C strategies for CF. These pathogens include severe acute respiratory syndrome coronavirus and the 2009 influenza A H1N1. Lessons learned about preventing transmission of methicillin-resistant Staphylococcus aureus (MRSA) and multidrug-resistant gram-negative pathogens in non-CF patient populations also can inform IP&C strategies for CF.

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“…It is also important to determine the number of housekeeping genes that should be used for MLSA. In general, three or more housekeeping genes have been commonly used in MLSA approach for the inference of phylogenetic relationships of rhizobia [2] [3] [20] [54]- [64]. In this study, we used three housekeeping genes, atpD, dnaK and glnII, to achieve a good resolution.…”

Section: Discussionmentioning

confidence: 99%

Multilocus Sequence Analysis of Root Nodule Bacteria Associated with <i>Lupinus</i> spp. and <i>Glycine max</i>

Beligala¹,

Michaels²,

Devries³

et al. 2017

AiM

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Lupinus is known to form endophytic associations with both nodulating and non-nodulating bacteria. In this study, multilocus sequence analysis (MLSA) was used to analyze phylogenetic relationships among root nodule bacteria associated with Lupinus and soybean. Out of 17bacterial strains analyzed, 13 strains isolated from root nodules of Lupinus spp. were obtained from the National Rhizobium Germplasm Resource Collection, USDA. Additionally, two strains of root-nodule bacteria isolated each from native Lupinus and domestic soybean were examined. Sequences of the 16S rRNA gene and three housekeeping genes (atpD, dnaK and glnII) were used. All the reference genes were retrieved from the existing complete genome sequences only. The clustering of 12 of the strains was consistent among single and concatenated gene trees, but not USDA strains 3044, 3048, 3504, 3715, and 3060. According to the concatenated phylogeny, we suggest that USDA 3040, 3042, 3044, 3048, 3051, 3060, 3504, 3709 and 3715 are Bradyrhizobium, USDA 3063 and 3717 are Mesorhizobium, USDA 3043 is Burkholderia and USDA 3057a is Microvirga. The two strains isolated from native lupines in this study are Burkholderia and Rhizobium, whereas the two from domestic soybean are Bradyrhizobium. This study emphasizes the robustness of MLSA, the diversity of bacterial species that are capable of nodulating lupine and the substantial capability of Burkholderia spp. to colonize lupine root nodules.

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Burkholderia pseudomultivorans sp. nov., a novel Burkholderia cepacia complex species from human respiratory samples and the rhizosphere

Cited by 118 publications

References 30 publications

Changing Epidemiology of the Respiratory Bacteriology of Patients With Cystic Fibrosis

Changing Epidemiology of the Respiratory Bacteriology of Patients With Cystic Fibrosis

Infection Prevention and Control Guideline for Cystic Fibrosis: 2013 Update

Multilocus Sequence Analysis of Root Nodule Bacteria Associated with <i>Lupinus</i> spp. and <i>Glycine max</i>

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Burkholderia pseudomultivorans sp. nov., a novel Burkholderia cepacia complex species from human respiratory samples and the rhizosphere

Cited by 118 publications

References 30 publications

Changing Epidemiology of the Respiratory Bacteriology of Patients With Cystic Fibrosis

Changing Epidemiology of the Respiratory Bacteriology of Patients With Cystic Fibrosis

Infection Prevention and Control Guideline for Cystic Fibrosis: 2013 Update

Multilocus Sequence Analysis of Root Nodule Bacteria Associated with &lt;i&gt;Lupinus&lt;/i&gt; spp. and &lt;i&gt;Glycine max&lt;/i&gt;

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Multilocus Sequence Analysis of Root Nodule Bacteria Associated with <i>Lupinus</i> spp. and <i>Glycine max</i>