To mimic organelles and cells and to construct next generation therapeutics, asymmetric functionalization and location of proteins for artificial vesicles is thoroughly needed to emphasize the complex interplay of biological units and systems through spatially separated and spatiotemporal controlled actions, release and communications. For the challenge of vesicle (= polymersome) construction, the membrane permeability and the location of the cargo are important key characteristics that determine the potential applications of them. Herein, an in situ and post loading process of avidin in pH-responsive and photocrosslinked polymersomes is developed and characterized. Firstly, loading efficiency, main location (inside, lumen, outside) and release of avidin under different conditions have been validated, including the pH-stable presence of avidin in polymersomes´ membrane outside and inside. This advantageous approach allows to selectively functionalize the outer and inner membrane as well the lumen with several bio(macro)molecules, generally suited for the construction of asymmetrically functionalized artificial organelles. In addition, a FRET effect was used to study the permeability or uptake of polymersomes membrane against a broad range of biotinylated (macro)molecules (different typology, sizes and shapes) at different conditions.