Body size characteristics and polymorphism in GH and GHRH genes of Simeulue Buffalo of Aceh, Indonesia

Eriani, Kartini; Rahmi, Rahmi; Jamil, Ikhwan; Rosnizar, Rosnizar; Azhar, Al

doi:10.13057/biodiv/d200127

Cited by 8 publications

(13 citation statements)

References 12 publications

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“…However, no statistical significance (P > 0.05) was determined in the Anatolian water buffalo breed. In contrast to this study, various studies conducted on 3 different GH gene regions (exon 5 -Alu I; intron 3 -Msp I; 3'UTR -Hae III) in water buffalo breeds reported them as monomorphic (Mitra et al, 1995;Vataliya, 2014, 2017;Eriani et al, 2019).…”

Section: Discussioncontrasting

confidence: 85%

Investigation of GH and GHRAlu I gene polymorphisms on meat yields in Anatolian water buffalo breed using PCR-RFLP method

Özşensoy¹,

Kara²

2019

Turk J Zool

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The Anatolian water buffalo is a native water buffalo breed only being reared in Turkey. The objective of this study was to investigate gene polymorphisms on exons 4 and 5 of the growth hormone (GH) and on exon 10 of the growth hormone receptor (GHR), which are thought to be related to meat yields of Anatolian water buffalo. Blood samples of 192 water buffaloes from Sivas Province were used in DNA extractions by phenol-chloroform method. DNA samples were amplified by using specific primers in PCR. PCR products were digested by Alu I (GH, n: 167) and Alu I (GHR, n: 192) restriction enzymes in order to determine polymorphisms. Digested PCR products were separated in 2.5%-3% agarose gel electrophoresis to determine allelic polymorphisms. As a result, the LL (78.44%) and LV (21.56%) genotypes and L (0.89) and V (0.11) alleles for the GH gene and the AA (7.81%) and AG (92.19%) genotypes and A (0.54) and G (0.46) alleles for the GHR gene were obtained. Gene polymorphisms were not detected (P > 0.05) on the GH gene, but a significant difference was found for the GHR gene (P < 0.001). Therefore, it can be said that Anatolian water buffaloes have increased meat yield due to the presence of genotypes in gene regions. This was the first investigation of enzyme polymorphisms of the GHR gene in Anatolian water buffaloes.

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Section: Discussioncontrasting

confidence: 85%

Investigation of GH and GHRAlu I gene polymorphisms on meat yields in Anatolian water buffalo breed using PCR-RFLP method

Özşensoy¹,

Kara²

2019

Turk J Zool

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“…The lowest coefficient of variation was found in the hind leg length of buffaloes from Lebak district, while the highest coefficient of variation was found in the horn length of buffaloes from the Tangerang District. These coefficients of variation are relatively higher than those of Gojri buffaloes (3.32-19.41%) (Vohra et al 2015), Brazilian buffaloes (3.65-16.68%) (de Melo et al 2018), and Aceh buffaloes (5.39-16.06%) (Eriani et al 2019).…”

Section: Morphometrics Description Of Indigenous Buffaloes Of Bantenmentioning

confidence: 82%

Morphometric diversity and phenotypic relationship among indigenous buffaloes of Banten, Indonesia

Murni¹,

Lestari²,

Indriwati³

et al. 2020

Biodiversitas

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Abstract. Murni D, Lestari U, Indriwati SE, Efendi A, Maryani N, Amin M. 2020. Morphometric diversity and phenotypic relationship among indigenous buffaloes of Banten, Indonesia. Biodiversitas 21: 933-940. This study aimed to describe the morphometric diversity and phenotypic relationship among indigenous buffaloes of Banten, Indonesia. In this study, 125 buffaloes from six regions were investigated based on 11 morphometric characters. Morphometric diversity was analyzed using multivariate discriminant analysis. The Euclidean genetic distances were used to estimate the phenotypic relationship among the buffalo populations. The indigenous buffaloes of Banten have high morphometric diversity, with a coefficient from 2.83 to 41.43%. The body length and chest circumference can be used as a morphometric marker to determine potential indigenous buffaloes as their high correlation coefficient value (0.506). The Serang district buffaloes have the highest mean of body length and chest circumference, which shows that this population is potential compared to the populations from other regions. The morphometric of buffalo population from Serang City, Cilegon City, Serang District, and Pandeglang District tend to be homogenous. Meanwhile, Lebak and Tangerang District population tends to heterogeneous. According to Euclidean distance analysis, the proximate phenotypic relationship was between Serang and Pandeglang District's buffalo populations. Our results indicated that morphometric diversity and phenotypic relationships of the populations were related to geographical origins and can be used to determine the potential indigenous of buffaloes.

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“…The significance of conducting buffalo development research is to fill the gap in the fundamental science behind the diversity of KBuf/TBuf breeds. Previous research only reported the productivity and epidemiology of diseases of buffaloes and provided limited information on genotypic and phenotypic characterization (Eriani et al 2019;Konda et al 2019;Pratama et al 2019;Yaemkong et al 2019;Priyono et al 2018;Terkawi et al 2011;Komariah et al 2014;Chaikhun et al 2010). Therefore, the exploration of phenotypic diversity and variation in KBuf/TBuf is necessary to assess the important aspects suitable for their breeding and development.…”

Section: Introductionmentioning

confidence: 99%

Phenotypic diversity characterization of Kalang and Thale Noi Buffalo (Bubalus bubalis) in Indonesia and Thailand: Perspectives for the buffalo breeding development

et al. 2020

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Abstract. Suhardi, Summpunn P, Duangjinda M, Wuthisuthimethavee S. 2020. Phenotypic diversity characterization of Kalang and Thale Noi Buffalo (Bubalus bubalis) in Indonesia and Thailand: Perspectives for the buffalo breeding development. Biodiversitas 21: 5128-5137. Kalang (KBuf) and Thale Noi buffaloes (TBuf) are swamp buffalo breeds important for biodiversity resources and permeate culture, religion, meat supply, and livelihood in Indonesia and Thailand. This study aimed to analyze the phenotypic characterization within breeds of KBuf/TBuf using quantitative and qualitative performance to define diversity. A total of 240 buffaloes from North (NK), East (EK), South Kalimantan (SK), Indonesia, and Phatthalung (PT), Thailand were observed. Phenotypic characterization showed female TBuf had the highest quantitative variable values with significant difference (P<0.05) from KBuf. Also, SK KBuf males had the highest qualitative variable values with significant difference (P<0.05) from EK and NK. The morphometric indices showed male buffaloes from SK and PT had close index values (P>0.05) and females from EK, SK, and PT showed a close relationship (P>0.05). The cumulative index results demonstrated KBuf/TBuf as very good meat-producing livestock. In conclusion, variations in qualitative and quantitative variables indicate phenotypic diversity in KBuf/TBuf which is a basis to perform selection and breeding development through pedigree recording, reproductive efficiency, cross-breeding, and genetic modification to produce high-quality buffalo breeding stock. KBuf/TBuf can provide high-quality red meat through improved genetic quality, productivity, and economic management towards modern buffalo breeding development.

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Body size characteristics and polymorphism in GH and GHRH genes of Simeulue Buffalo of Aceh, Indonesia

Cited by 8 publications

References 12 publications

Investigation of GH and GHRAlu I gene polymorphisms on meat yields in Anatolian water buffalo breed using PCR-RFLP method

Investigation of GH and GHRAlu I gene polymorphisms on meat yields in Anatolian water buffalo breed using PCR-RFLP method

Morphometric diversity and phenotypic relationship among indigenous buffaloes of Banten, Indonesia

Phenotypic diversity characterization of Kalang and Thale Noi Buffalo (Bubalus bubalis) in Indonesia and Thailand: Perspectives for the buffalo breeding development

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