Autophagy is an evolutionarily conserved cellular degradation and recycling process. It is important for maintaining vital cellular function and metabolism. Abnormal autophagy activity can cause the development of various diseases. N
6
-methyladenosine (m
6
A) methylation is the most prevalent and abundant internal modification in eukaryotes, affecting almost all aspects of RNA metabolism. The process of m
6
A modification is dynamic and adjustable. Its regulation depends on the regulation of m
6
A methyltransferases, m
6
A demethylases, and m
6
A binding proteins. m
6
A methylation and autophagy are two crucial and independent cellular events. Recent studies have shown that m
6
A modification mediates the transcriptional and post-transcriptional regulation of autophagy-related genes, affecting autophagy regulatory networks in multiple diseases. However, the regulatory effects of m
6
A regulators on autophagy in human diseases are not adequately acknowledged. In the present review, we summarized the latest knowledge of m
6
A modification in autophagy and elucidated the molecular regulatory mechanisms underlying m
6
A modification in autophagy regulatory networks. Moreover, we discuss the potentiality of m
6
A regulators serving as promising predictive biomarkers for human disease diagnosis and targets for therapy. This review will increase our understanding of the relationship between m
6
A methylation and autophagy, and provide novel insights to specifically target m
6
A modification in autophagy-associated therapeutic strategies.