The inhibitory glycine receptor is a ligand-gated ion channel with a pentameric assembly from ligand binding ␣ and structural  subunits. In addition to ␣ subunit gene variants (␣1-␣4) and developmental alterations in subunit composition of the receptor protein complex, alternative splicing of ␣ subunits has been found to contribute to glycine receptor heterogeneity. Here, we describe a novel splice variant of the glycine receptor  subunit from mouse central nervous system, prevailing in macroglial cells, predominantly in astrocytes and extraneural tissues. As predicted by its cDNA sequence, the novel subunit ⌬7 lacks amino acid positions 251-302 encoded by exon 7 of the Glrb gene. Transcripts and antigen of ⌬7 were detected in cerebral cortex, liver, and heart. Lack of exon 7 results in a profoundly altered prediction of transmembrane topology as ⌬7 lacks TM1 and TM2 present in the full-length variant. Despite these topological alterations, in vitro studies showed that the ⌬7 polypeptide integrates into the plasma membrane, forming receptor complexes with the ␣1 subunit and gephyrin. Our data demonstrate that a topology deviating from the classical four transmembrane-fold is compatible with formation of glycine receptor protein complexes. However, co-expression of ␣1 with ⌬7 subunits did not change glycine receptor channel properties. Rather, the high level of expression in non-neuronal cells having intimate contact with synaptic regions may account for a yet unknown function of this splice variant ⌬7 in glycinergic neurotransmission.
Glycine receptors (GlyRs)2 belong to the superfamily of Cysloop receptors, which also include nicotinic acetylcholine receptors, ionotropic ␥-aminobutyric acid receptors (GABA A and GABA C ), and the ionotropic serotonin receptor subtype 5HT 3 (1). GlyRs are pentameric assemblies of five subunits surrounding a central ion-conducting pore that mediates rapid inhibitory neurotransmission in the spinal cord and brainstem (2, 3). Common features of all Cys-loop receptor subunits include four transmembrane regions (TM1-TM4), where TM2 forms the ion channel pore, and a large extracellular N-terminal ligand-binding domain. This domain shows significant structural homology to the acetylcholine-binding protein of Lymnaea stagnalis (4), a member of the immunoglobulin-like superfamily of proteins. By association of  subunits with the intracellular anchor protein gephyrin, GlyRs are clustered at the postsynaptic membrane. The gephyrin binding motif of the  subunit polypeptide has been mapped to the long intracellular TM3-4 loop (5-9).The GlyR  subunit gene is widely transcribed throughout the central nervous system of neonatal and adult rodents. Starting at embryonic day 14,  transcripts are first detectable by in situ hybridization in rat spinal cord and telencephalon (10, 11). Expression of the ligand binding ␣ subunit variants (␣1-␣4) is highly regulated during development (12, 13). Further GlyR subunit heterogeneity is generated by alternative splicing and RNA editing (␣1 and ␣...