Antecedent soil moisture prior to freezing can affect quantity, composition and stability of soil dissolved organic matter during thaw

et al. 2018

Front. Microbiol.

Expansion of penguin activity in maritime Antarctica, under ice thaw, increases the chances of penguin feces affecting soil microbiomes. The detail of such effects begins to be revealed. By comparing soil geochemistry and microbiome composition inside (one site) and outside (three sites) of the rookery, we found significant effects of penguin feces on both. First, penguin feces change soil geochemistry, causing increased moisture content (MC) of ornithogenic soils and nutrients C, N, P, and Si in the rookery compared to non-rookery sites, but not pH. Second, penguin feces directly affect microbiome composition in the rookery, not those outside. Specifically, we found 4,364 operational taxonomical units (OTUs) in 404 genera in six main phyla: Proteobacteria, Actinobacteria, Gemmatimonadetes, Acidobacteria, Chloroflexi, and Bacteroidetes. Although the diversity is similar among the four sites, the composition is different. For example, penguin rookery has a lower abundance of Acidobacteria, Chloroflexi, and Nitrospirae but a higher abundance of Bacteroidetes, Firmicutes, and Thermomicrobia. Strikingly, the family Clostridiaceae of Firmicutes of penguin-feces origin is most abundant in the rookery than non-rookery sites with two most abundant genera, Tissierella and Proteiniclasticum. Redundancy analysis showed all measured geochemical factors are significant in structuring microbiomes, with MC showing the highest correlation. We further extracted 21 subnetworks of microbes which contain 4,318 of the 4,364 OTUs using network analysis and are closely correlated with all geochemical factors except pH. Our finding f penguin feces, directly and indirectly, affects soil microbiome suggests an important role of penguins in soil geochemistry and microbiome structure of maritime Antarctica.

Section: Discussionmentioning

confidence: 99%

Direct and Indirect Effects of Penguin Feces on Microbiomes in Antarctic Ornithogenic Soils

Guo

et al. 2018

Front. Microbiol.

“…Only a few studies have reported that freeze –thaw changed the chemical composition of DOM. They found that FTC reduced the polysaccharide content and increased the lignin content of DOM in forest soils ( Schmitt et al, 2008 ; Wu et al, 2017 ).…”

Section: Introductionmentioning

confidence: 99%

Linkages between the molecular composition of dissolved organic matter and soil microbial community in a boreal forest during freeze–thaw cycles

Yang

Cheng²,

Fang³

et al. 2023

Front. Microbiol.

Soil dissolved organic matter (DOM) plays a vital role in biogeochemical processes. Global warming leads to increased freeze–thaw cycles (FTCs) in boreal forest soils, which can change DOM production and consumption. However, the interactions between the chemical composition of DOM molecules and the microbial communities that drive C decomposition in the context of freeze–thaw are poorly understood. Here, a FTCs incubation experiment was conducted. Combined with pyrolysis gas chromatography–mass spectrometry and high-throughput sequencing techniques, the relationships between DOM chemodiversity and microbial community structure were assessed. Results indicated that both low-frequency (2FTCs) and high-frequency freeze–thaw cycles (6FTCs) significantly increased soil dissolved organic carbon (DOC) contents in the surface (0–10 cm) and subsurface (50–60 cm) soil layers. In the topsoil, FTCs significantly reduced the relative abundance of aromatic compounds, but increased the relative proportions of alkanes, phenols, fatty acid methyl esters (Me) and polysaccharides in the DOM. In the subsuface soil layer, only the relative abundance of Me in the 6FTCs treatment increased significantly. The response of bacterial communities to FTCs was more sensitive than that of fungi, among which only the relative abundance of Gammaproteobacteria increased by FTCs. Moreover, the relative abundance of these taxa was positively correlated with the increment of DOC. Co-occurrence networks confirmed DOM-bacterial interactions, implying that specific microorganisms degrade specific substrates. At class level, Gammaproteobacteria were significantly positively correlated with labile C (polysaccharides and alkanes), whereas other bacterial classes such as Actinobacteria, Alphaproteobacteria, and Thermoleophilia were significantly positively correlated with aromatic compounds in the topsoil. Collectively, FTCs tended to activate DOM and enhance its biodegradability of DOM, potentially hampering DOC accumulation and C sequestration. These findings highlight the potential of DOM molecular mechanisms to regulate the functional states of soil bacterial communities under increased FTCs.

“…Although DOM accounts for less than 5% of the soil organic matter by weight [2], it is the most movable and reactive fraction of carbon (C) in forest soils [3], and is a critical component of biogeochemical cycles in regulating soil respiration, plant nutrient absorption and microbial metabolism of receiving aquatic systems. Among the components of DOM, protein-like components are considered more biologically active than the humic-and fulvic-like components [4,5]. As the essential source of energy for forest ecosystems [6], DOM plays a significant role in the C and nutrient budgets of forest soils [7].…”

Section: Introductionmentioning

confidence: 99%

Dissolved Organic Matter as Affected by Forms and Doses of Nitrogen Applied to Soils of Temperate Deciduous Forests in China

Song

2023

Forests

Dissolved organic matter (DOM) is an important component in the biogeochemical cycles of elements like nitrogen (N) and carbon. The aim of this study was to elucidate the effect of long-term inorganic N addition on the quantity and quality of DOM in forest soils. A field study was conducted on three forms of inorganic N, namely (NH4)2SO4, NH4NO3, and NaNO3, applied at low (50 kg N ha−1) or high (150 kg N ha−1) annual doses from 2011 to 2019. The total dose was split into eight equal monthly doses applied during the growing season (from March to October). Both the form and the dose increased the content of dissolved organic carbon (DOC) in soil, the strongest effect being that of NaNO3. However, the higher dose had a weaker effect because of N enrichment. UV-visible (UV-vis) and excitation-emission matrix (EEM) spectroscopy showed that the addition of N made DOM more aromatic and increased the degree of humification. EEM-parallel factor analysis (PARAFAC) modelling suggested that DOM in the forest soils mainly contained a fulvic-like constituent (C1), humic-like substances (C2), and aromatic protein-like components (C3). The addition did not change the position of the DOM fluorophore in the soil but affected the proportions of the three PARAFAC-derived components (increasing those of C1 and C2 but decreasing that of C3), indicating that long-term addition of N may amplify the decrease in protein-like constituents of surface soil. Hence, N addition increased the complexity of the DOM structure.