Our recent study has shown that A3-crystallin along with B1-and B2-crystallins were part of high molecular weight complex obtained from young, old, and cataractous lenses suggesting potential interactions between ␣-and -crystallins (Srivastava, O. P., Srivastava, K., and Chaves, J. M. (2008) Mol. Vis. 14, 1872-1885). To investigate this further, this study was carried out to determine the interaction sites of A3-crystallin with ␣A-and ␣B-crystallins. The study employed a mammalian two-hybrid method, an in vivo assay to determine the regions of A3-crystallin that interact with ␣A-and ␣B-crystallins. Five regional truncated mutants of A3-crystallin were generated using specific primers with deletions of N-terminal extension (NT) (named A3-NT), N-terminal extension plus motif I (named A3-NT ؉ I), N-terminal extension plus motifs I and II (named A3-NT ؉ I ؉ II), motif III plus IV (named A3-III ؉ IV), and motif IV (named A3-IV). The mammalian two-hybrid studies were complemented with fluorescence resonance energy transfer acceptor photobleaching studies using the above described mutant proteins, fused with DsRed (Red) and AcGFP fluorescent proteins. The results showed that the motifs III and IV of A3-crystallin were interactive with ␣A-crystallin, and motifs II and III of A3-crystallin primarily interacted with ␣B-crystallin.The structural proteins (crystallins) of the vertebrate lens belong to two families, i.e. ␣-crystallin and -␥ crystallins superfamily. Although ␣-crystallin is made of two primary gene products of ␣A and ␣B-crystallins, the -␥ superfamily is constituted by four acidic (A1, A2, A3, and A4) and three basic (B1, B2, and B3) -crystallins and six ␥-crystallins (␥A, ␥B, ␥C, ␥D, ␥E, and ␥F) (1, 2). High concentrations of these crystallins and their interactions provide refractive power to the lens for focusing light on to the retina. Both ␣A-and ␣B-crystallins also function as molecular chaperons and prevent aberrant protein interactions and protein unfolding. The -and ␥-crystallins have only structural properties (2-4), except that our results showed that A3 crystallin contains proteinase activity (5, 6). The expressions of the crystallins are both developmentally and spatially regulated (1), and their interactions lead to the transparency of the lens because of short range order of the crystallin matrix (7,8).Previous reports have shown that the ␣-crystallin interacts with other crystallins and intermediate filaments (2). An interaction of ␣-crystallin with L-crystallin produced filament-like structures, and similar interactions between L-crystallin with ␣A-crystallin (isolated from UV-A-irradiated lenses) showed even more pronounced filament formation (9). A similar study of interaction between ␣-crystallin and L-crystallin at 60°C produced soluble complexes with mean radius of gyration ϳ14 nm, mean molecular mass of ϳ4 ϫ 10 6 Da, and maximum size of 40 nm (10). Recently, we dissociated a fraction containing A3-, B1-, and B2-crystallins from the ␣-crystallin fraction o...