velopment of hypertension stems from both environmental and genetic factors wherein the kidney plays a central role. Spontaneously hypertensive rats (SHR) and the nonhypertensive Wistar-Kyoto (WKY) controls are widely used as a model for studying hypertension. The present study examined the renal gene expression profiles between SHR and WKY at a prehypertensive stage (3 wk of age) and hypertensive stage (9 wk of age). Additionally, age-related changes in gene expression patterns were examined from 3 to 9 wk in both WKY and SHR. Five to six individual kidney samples of the same experimental group were pooled together, and quadruplicate hybridizations were performed using the National Institute of Environmental Health Sciences Rat version 2.0 Chip, which contains ϳ6,700 genes. Twenty two genes were found to be differentially expressed between SHR and WKY at 3 wk of age, and 104 genes were differentially expressed at 9 wk of age. Soluble epoxide hydrolase (Ephx2) was found to be significantly upregulated in SHR at both time points and was the predominant outlier. Conversely, elastase 1 (Ela1) was found to be the predominant gene downregulated in SHR at both time points. Analysis of profiles at 3 vs. 9 wk of age identified 508 differentially expressed genes in WKY rats. In contrast, only 211 genes were found to be differentially expressed during this time period in SHR. The altered gene expression patterns observed in the age-related analysis suggested significant differences in the vascular extracellular matrix system between SHR and WKY kidney. Together, our data highlight the complexity of hypertension and the numerous genes involved in and affected by this condition. soluble epoxide hydrolase; hypertension; arachidonic acid; elastase; real-time polymerase chain reaction HYPERTENSION IS A MAJOR RISK factor for cardiovascular disease, renal failure, and stroke and is associated with significant morbidity and mortality (6). Many systems and factors contribute to the regulation of blood pressure, such as the reninangiotensin-aldosterone system, extracellular matrix, and endothelin. Alteration in the complex array of polygenic and environmental factors that regulate blood pressure results in hypertension. Such perturbations commonly affect salt homeostasis, intravascular volume, and systemic vascular resistance (23). Even with such a diversity of physiological systems that control blood pressure, the majority of genetic and acquired forms of hypertension involve the kidney (23, 28, 38). Indeed, renal transplantation studies demonstrating the transfer of the hypertension phenotype from donor to recipient highlight a key role of the kidney in this disease (15, 39). Investigation into the renal gene expression profiles that accompany hypertension will help identify potentially important causes of this disease and/or novel therapeutic targets.Increased prevalence of hypertension with age coincides with changes in blood pressure patterns and reflects differences in hemodynamics between young and old hypertensives (10 -12,...