A theoretical approach for discriminating accurately intrinsic pattern of biological systems and recognizing three kind soybean proteomes

Abstract

proteomics is able to reveal plentiful information related to different physiological and pathological states of biology. Further, the determination of accurately proteomic pattern is the essential platform for deeply proteomic research. While this has been somewhat ignored so far. In this article the quantitative standard Pg=61%, a biological similarity constant for discriminating accurately intrinsic proteomic patterns was established depending on biological common heredity and variation information equation in symmetric variation state. On the other hand, a novel theoretical method was proposed for linearly dividing nonlinear data sequence into linear segments. The proteomes of three kind soybeans were precisely distinguished from one another by analyzing their infrared fingerprint spectra relying on this theoretically systemic approach. Additionally, methods employed in this paper enable us to quickly, accurately and quantitatively determine the proteomic patterns without using any prior knowledge and learning samples, and without using electrophoresis, high performance liquid chromatography-mass spectrometry techniques, which are high cost, time-consuming. This approach provide us with an excellent one for quickly accurate determining biological species, physiological states and diagnosing pathological states based on proteomes.

Three criteria of intrinsically theoretical categories in biological system and classification of some medical plants

“…Certainly, for the two constants, they may correspond to two intrinsically taxonomic categories, which should correspond to any two different biological ranks, such as species and subspecies, genus, subgenus, family and so on. These have been proved successfully by some researches [33,34]. These researches indicated the theoretically taxonomic categories, existed intrinsically in the equation, do not onetoone correspond to empirical ranks of biology, obtained by means of empirical classification.…”

“…The meanings of variables in the equation (3), (4), as in [30,31,32,33,34,35] were listed bellow. g P , common (heredity) peak(element, molecule)ratio, it can be briefly expressed as P.…”

“…Genus and Subgenus of pine could be discriminated precisely depending on information of molecular species in oleoresins [33], and four species of combination herbal medicines [33,35] were identified perfectly by means of the two constants. Three kinds of soybean proteomes were pattern recognized subtly by using the constant Pg2=0.61, together with structure information of macro-molecules [34].…”

“…According to article [30,31,32,33,34,35], for any two samples in a sample set, we can view them is a biological system. Theoretically, when their Pg ≧ 69%, they are in the asymmetric variation state, and they are of the identical properties.…”

“…Author ZOU has deeply investigated this subject and proposed a theory, biological common heredity and variation information equation based on simple physical chemistry action model of heredity and variation substances [30]. Relying on the previous research fundamental [30,31,32,33,34,35], In this paper a generalized biological common heredity and variation information equation was further built up, theoretically which is qualified to describe heredity and variation at multiply material levels, such as various material structure units, biological molecules.…”