Safety assessment of plant varieties using transcriptomics profiling and a one-class classifier

Tuber proteome comparison of five potato varieties by principal component analysis

“…Recently a one‐class SIMCA tool was explored to assess and classify transcriptome datasets of the same potatoes used in this study . The PCA also presented separation according to varieties; therefore cross‐validation for the SIMCA model was performed by variety.…”

“…The PCA also presented separation according to varieties; therefore cross‐validation for the SIMCA model was performed by variety. The set of models developed in that work correctly classified samples with high technical variability as belonging or not belonging to a safe class …”

“…41 Recently a one-class SIMCA tool was explored to assess and classify transcriptome datasets of the same potatoes used in this study. 29 The PCA also presented separation according to varieties; therefore cross-validation for the SIMCA model was performed by variety. The set of models developed in that work correctly classified samples with high technical variability as belonging or not belonging to a safe class.…”

“…The purpose was to compare sample groupings by PCA plots in two approaches: having their missing values substituted or simply eliminated from the dataset. The objective was to analyze by proteomics the same five potato varieties that were already analyzed by transcriptomics …”

“…The objective was to analyze by proteomics the same five potato varieties that were already analyzed by transcriptomics. 29…”