Various ontology visualization tools using different visualization methods exist and new ones are being developed every year. The goal of this paper is to follow up on previous surveys with an updated classification of ontology visualization methods and a comprehensive survey of available tools. The tools are analyzed for the used visualization methods, interaction techniques and supported ontology constructs. It shows that most of the tools apply two-dimensional node-link visualizations with a focus on class hierarchies. Color and shape are used with little variation, support for constructs introduced with version 2 of the OWL Web Ontology Language is limited, and it often remains vague what tasks and use cases are supported by the visualizations. Major challenges are the limited maturity and usability of many of the tools as well as providing an overview of large ontologies while also showing details on demand. We see a high demand for a universal ontology visualization framework implementing a core set of visual and interactive features that can be extended and customized to respective use cases.
BackgroundThe Blue Obelisk movement was established in 2005 as a response to the lack of Open Data, Open Standards and Open Source (ODOSOS) in chemistry. It aims to make it easier to carry out chemistry research by promoting interoperability between chemistry software, encouraging cooperation between Open Source developers, and developing community resources and Open Standards.ResultsThis contribution looks back on the work carried out by the Blue Obelisk in the past 5 years and surveys progress and remaining challenges in the areas of Open Data, Open Standards, and Open Source in chemistry.ConclusionsWe show that the Blue Obelisk has been very successful in bringing together researchers and developers with common interests in ODOSOS, leading to development of many useful resources freely available to the chemistry community.
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