An isolated beta-sheet model system is investigated in a molecular beam experiment by means of mass- and isomer-selective IR/R2PI double resonance spectroscopy as well as ab initio and DFT calculations. As the exclusive intermolecular assembly, a beta-sheet motif is formed by spontaneous dimerization of two isolated peptide molecules. This secondary structure is produced from the tripeptide model Ac-Val-Tyr(Me)-NHMe without any further environment to form the binding motif which is analyzed by both the characteristic amide A and I vibrations. The experimental and theoretical investigations yield the assignment to an antiparallel beta-sheet model. The result of this detailed spectroscopic analysis on an isolated beta-sheet model indicates that there are intrinsic properties of a beta-sheet structure which can be formed without a solvent or a peptidic environment.
Femtosecond polarization resolved UV/Vis and mid-infrared spectroscopy was used to thoroughly identify and characterize the relevant elementary chemical and physical processes in the photocycle of 3-hydroxyflavone (3-HF) in solution. In one set of experiments with the polar aprotic solvent acetonitrile-d(3), for the first time excited state intramolecular proton transfer (ESIPT), vibrational cooling/relaxation and rotational diffusion could be separated, and furthermore mid IR vibrational spectra of 3-HF excited states in solution phase were obtained. UV/Vis transient absorption data yield the time constant τ(Rot) = 22 ps for rotational diffusion and the time constant τ(VR) = 8.5 ps for vibrational cooling/relaxation in the tautomer excited state (S(1)'). Biphasic ESIPT with τ < 120 fs and τ = 2.4 ps as well as slow ground state recovery with τ > 500 ps was found. The time resolved mid IR data yield a time constant of ≈3.4 ps for the slow ESIPT step as well as the vibrational frequencies of S(0,) S(1)' and, in particular those of the short lived excited state S(1). Via quantum chemical calculations, structural parameters of these states are obtained. Various models were used, namely for the isolated molecule, aggregates with solvent as well as a polarizable continuum, that allow us to correlate the two ESIPT components with two mechanisms. Results are compared to those from previously published gas-phase experiments and indicate that the observed slow ESIPT is mediated by solute-solvent interaction via a hydrogen bond with the hydroxyl group of 3-HF.
IR/R2PI-spectroscopy has been applied to the electronic ground and electronically excited states of 3-hydroxyflavone (3-HF) and 2-(2-naphthyl)-3-hydroxychromone (2-NHC) in a supersonic jet yielding direct structural information on the educt and product of a proton transfer reaction. We show that IR spectra of the electronically excited states can be recorded subsequent to a photoinduced chemical reaction, in this case a proton transfer. In combination with DFT and TDDFT calculations structural assignments are performed.
The structure and reactivity of isolated 3-hydroxyflavone (3-HF) aggregates with one and two water molecules has been investigated by applying combined infrared/ultraviolet (IR/UV) spectroscopy in a supersonic jet both for the electronic ground and excited states. In combination with density functional theory (DFT) calculations, the IR spectra of the S(0) states recorded from the upper fingerprint region to the OH stretching vibrations are assigned to the most stable isomers of the clusters. For the first electronically excited (pi pi(*)) state of the 3-HF(H(2)O)(2) cluster structural information are obtained from the IR spectra in combination with time-dependent-DFT (TD-DFT) calculations. No proton transfer structure is observed in the case of a low excess energy within the electronically excited state. By raising the excitation energy, additional bands appear that can be assigned to a tautomeric form indicating the induction of a proton transfer reaction.
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