Background Fusarium crown rot (FCR) is a chronic disease in cereal production worldwide. The impact of this disease is highly environmentally dependant and significant yield losses occur mainly in drought-affected crops. Results In the study reported here, we evaluated possible relationships between genes conferring FCR resistance and drought tolerance using two approaches. The first approach studied FCR induced differentially expressed genes (DEGs) targeting two barley and one wheat loci against a panel of genes curated from the literature based on known functions in drought tolerance. Of the 149 curated genes, 61.0% were responsive to FCR infection across the three loci. The second approach was a comparison of the global DEGs induced by FCR infection with the global transcriptomic responses under drought in wheat. This analysis found that approximately 48.0% of the DEGs detected one week following drought treatment and 74.4% of the DEGs detected three weeks following drought treatment were also differentially expressed between the susceptible and resistant isolines under FCR infection at one or more timepoints. As for the results from the first approach, the vast majority of common DEGs were downregulated under drought and expressed more highly in the resistant isoline than the sensitive isoline under FCR infection. Conclusions Results from this study suggest that the resistant isoline in wheat was experiencing less drought stress, which could contribute to the stronger defence response than the sensitive isoline. However, most of the genes induced by drought stress in barley were more highly expressed in the susceptible isolines than the resistant isolines under infection, indicating that genes conferring drought tolerance and FCR resistance may interact differently between these two crop species. Nevertheless, the strong relationship between FCR resistance and drought responsiveness provides further evidence indicating the possibility to enhance FCR resistance by manipulating genes conferring drought tolerance.
Multiple species of Fusarium can infect wheat and barley plants at various stages of development. Fusarium head blight (FHB) refers to the infection of spikes and developing kernels by these pathogens, and crown rot (FCR) infers to infection of the root, crown, and basal stem by Fusarium pathogens. Interestingly, most of the host genes conferring resistance to these two diseases are different in both wheat and barley, and plants’ susceptibility to these two diseases are oppositely affected by both plant height and reduced water availability. Available results do not support the hypothesis that reduced height genes have different effects on biotrophic and necrotrophic diseases. Rather, differences in temperature and humidity in microenvironments surrounding the infected tissues and the difference in the physical barriers originating from the difference in cell density seem to be important factors affecting the development of these two diseases. The fact that genes conferring resistance to Type I and Type II of FHB are different indicates that it could be feasible to identify and exploit genes showing resistance at the three distinct stages of FCR infection for breeding varieties with further enhanced resistance. The strong association between FCR severity and drought stress suggests that it should be possible to exploit some of the genes underlying drought tolerance in improving resistance to FCR.
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