ABCA4, a member of the family of ATP binding cassette (ABC) proteins found in rod and cone photoreceptors, has been implicated in the transport of retinoid compounds across the outer segment disk membrane following the photoactivation of rhodopsin. Mutations in the ABCA4 gene are responsible for Stargardt macular dystrophy and related retinal degenerative diseases that cause a loss in vision. To identify the retinoid substrate that interacts with ABCA4, we have isolated ABCA4 from rod outer segment disk membranes on an immunoaffinity matrix and analyzed retinoid compounds that bind to ABCA4 using high performance liquid chromatography and radiolabeling methods. When all-trans-retinal was added to ABCA4 in the presence of phosphatidylethanolamine, ϳ0.9 mol of N-retinylidenephosphatidylethanolamine and 0.3 mol of all-trans-retinal were bound per mol of ABCA4 with an apparent K d of 2-5 M. ATP and GTP released these retinoids from ABCA4, whereas ADP, GDP, and nonhydrolyzable derivatives, adenosine 5-(,␥-imido)triphosphate and guanosine 5-(,␥-imido)triphosphate, were ineffective. One mole of N-retinyl-phosphatidylethanolamine, the reduced form of N-retinylidene-phosphatidylethanolamine, bound per mol of ABCA4, whereas 0.3 mol of all-trans-retinal were bound in the absence of phosphatidylethanolamine. No binding of all-trans-retinol to ABCA4 was observed. Our results indicate that ABCA4 preferentially binds N-retinylidene-phosphatidylethanolamine with high affinity in the absence of ATP. Our studies further suggest that ATP binding and hydrolysis induces a protein conformational change that causes N-retinylidene-phosphatidylethanolamine to dissociate from ABCA4.ABCA4, also known as ABCR or the rim protein, is a member of the ABCA subfamily of ATP binding cassette (ABC) 1 transporters (1-3). It is localized along the rims and incisures of rod and cone photoreceptor outer segment disk membranes where it is thought to play a role in the visual cycle (3-5). Mutations in the gene encoding ABCA4 are responsible for a variety of autosomal recessive retinal degenerative diseases that cause a severe loss in vision. These include Stargardt macular dystrophy, fundus flavimaculatus, cone-rod dystrophy, and retinitis pigmentosa (1, 6 -9). Mutations in ABCA4 have also been suggested to predispose individuals to age-related macular degeneration (10). ABCA4 is a 250-kDa glycoprotein that is organized as two tandemly arranged halves each containing a transmembrane segment followed by a large extracellular domain, a multispanning membrane domain, and a nucleotide binding domain (3, 11). Biochemical studies have implicated ABCA4 in the movement of retinoids across the disk membrane. The ATPase activity of immunoaffinity purified ABCA4 is increased up to 4-fold by the addition of 11-cis or all-trans-retinal, but not other retinoids (12)(13)(14). Abca4 knockout mice show a light-dependent increase in all-trans-retinal, N-retinylidene-PE, and PE in photoreceptor outer segments, and a progressive accumulation of the diretinal pyridinium ...