Inferring drug-disease associations is critical in unveiling disease mechanisms, as well as discovering novel functions of available drugs, or drug repositioning. Previous work is primarily based on drug-gene-disease relationship, which throws away many important information since genes execute their functions through interacting others. To overcome this issue, we propose a novel methodology that discover the drug-disease association based on protein complexes. Firstly, the integrated heterogeneous network consisting of drugs, protein complexes, and disease are constructed, where we assign weights to the drug-disease association by using probability. Then, from the tripartite network, we get the indirect weighted relationships between drugs and diseases. The larger the weight, the higher the reliability of the correlation. We apply our method to mental disorders and hypertension, and validate the result by using comparative toxicogenomics database. Our ranked results can be directly reinforced by existing biomedical literature, suggesting that our proposed method obtains higher specificity and sensitivity. The proposed method offers new insight into drug-disease discovery. Our method is publicly available at http://1.complexdrug.sinaapp.com/Drug_Complex_Disease/Data_Download.html.
In existing sophisticated text-to-SQL models, schema linking is often considered as a simple, minor component, belying its importance. By providing a schema linking corpus based on the Spider text-to-SQL dataset, we systematically study the role of schema linking. We also build a simple BERT-based baseline, called Schema-Linking SQL (SLSQL) to perform a data-driven study. We find when schema linking is done well, SLSQL demonstrates good performance on Spider despite its structural simplicity. Many remaining errors are attributable to corpus noise. This suggests schema linking is the crux for the current textto-SQL task. Our analytic studies provide insights on the characteristics of schema linking for future developments of text-to-SQL tasks. 1 * Equal contribution.
The multi-layer computing model is developed to calculate wide-angle neutron spectra, in the range from 0° to 180° with a 5° step, produced by bombarding a thick beryllium target with deuterons. The double-differential cross-sections (DDCSs) for the 9Be(d, xn) reaction are calculated using the TALYS-1.8 code. They are in agreement with the experimental data, and are much better than the PHITS-JQMD/GEM results at 15° , 30° , 45° and 60° neutron emission angles for deuteron energy of 10.0 MeV. In the TALYS-1.8 code, neutron contributions from direct reactions (break-up, stripping and knock-out reactions) are controlled by adjustable parameters, which describe the basic characteristics of typical direct reactions and control the relative intensity and the position of the ridgy hillock at the tail of DDCSs. It is found that the typical calculated wide-angle neutron spectra for different neutron emission angles and neutron angular distributions agree quite well with the experimental data for 13.5 MeV deuterons. The multi-layer computing model can reproduce the experimental data reasonably well by optimizing the adjustable parameters in the TALYS-1.8 code. Given the good agreement with the experimental data, the multi-layer computing model could provide better predictions of wide-angle neutron energy spectra, neutron angular distributions and neutron yields for the 9Be(d, xn) reaction neutron source.
1. The stability of a plant community is defined as its ability to resist and be resilient to changes. Plant community stability can be driven by a range of external perturbations as well as by plant community traits. Plant litter traits (species or mass) are widely recognized drivers for plant community composition and diversity changes in grasslands. Yet, the effects of litter traits on the temporal stability of plant communities in natural grasslands are largely unknown.2. In this study, a field experiment was conducted at an alpine meadow on the Qinghai Tibetan Plateau to quantify the effects of litter from Elymus nutans, Kobresia setchwanensis and Ligularia virgaurea on the temporal stability of plant community biomass at five different mass levels (0, 100, 200, 400 and 600 g/m 2 ).The experiment was conducted over the period from the pre-growth to peakgrowth stage between 2017 and 2019, during which temporal stability of plant community biomass was assessed in relation to plant community characteristics.3. The effects of litter on temporal stability of plant community biomass were mainly driven by the litter mass rather than the litter species. A hump-shaped relationship between litter mass and temporal stability of plant community biomass was found, with the highest stability under intermediate litter mass treatment (200 g/m 2 ).A structural equation model identified that this response was driven by the indirect effects of litter mass on the temporal stability of the biomass of the dominant (forbs) and subdominant (grasses) functional groups in the community and the asynchrony of plant functional groups.4. The results of this study demonstrate that plant litter traits are important drivers for maintaining plant community stability in natural grasslands, highlighting the importance of grassland management decisions (e.g. grazing intensity) relating to the quantity and quality of litter accumulation.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.