Low band gap (E(g) < 1.5 eV) polycyclic hydrocarbons have become one of the most important types of materials for many applications, for example, as semiconductors in organic field effect transistors (OFETs), as light-harvesting dyes in organic solar cells and photodetectors, as near infrared (NIR) fluorescent probes in high resolution bio-imaging and bio-sensing, and as chromophores in non-linear optics. The benzenoid polycyclic hydrocarbons as nano-sized graphene fragments also serve as perfect model compounds to understand the fundamental structure-property relationship of graphene. The ground state of these molecules can be described as either a closed-shell or an open-shell structure on the basis of their molecular size and edge structure. In this review, a summary will be given on a series of low band gap polycyclic hydrocarbons about their synthesis, physical properties and material applications.
Researchers have studied polycyclic aromatic hydrocarbons (PAHs) for more than 100 years, and most PAHs in the neutral state reported so far have a closed-shell electronic configuration in the ground state. However, recent studies have revealed that specific types of polycyclic hydrocarbons (PHs) could have a singlet biradical ground state and exhibit unique electronic, optical, and magnetic activities. With the appropriate stabilization, these new compounds could prove useful as molecular materials for organic electronics, nonlinear optics, organic spintronics, organic photovoltaics, and energy storage devices. However, before researchers can use these materials to design new devices, they need better methods to synthesize these molecules and a better understanding of the fundamental relationship between the structure and biradical character of these compounds and their physical properties. Their biradical character makes these compounds difficult to synthesize. These compounds are also challenging to physically characterize and require the use of various experimental techniques and theoretic methods to comprehensively describe their unique properties. In this Account, we will discuss the chemistry and physics of three types of PHs with a significant singlet biradical character, primarily developed in our group. These structures are zethrenes, Z-shaped quinoidal hydrocarbons; hydrocarbons that include a proaromatic extended p-quinodimethane unit; and periacenes, acenes fused in a peri-arrangement. We used a variety of synthetic methods to prepare these compounds and stabilized them using both thermodynamic and kinetic approaches. We probed their ground-state structures by electronic absorption, NMR, ESR, SQUID, Raman spectroscopy, and X-ray crystallography and also performed density functional theory calculations. We investigated the physical properties of these PHs using various experimental methods such as one-photon absorption, two-photon absorption, transient absorption spectroscopy, electrochemistry, and spectroelectrochemistry. These systematic studies revealed that aromaticity played a very important role in determining their singlet biradical character, which is critically related to both their physical properties and their chemical reactivity. In particular, we found that Clar's aromatic sextet rule, which is useful for the closed-shell PAHs, can also predict the relative biradical character of benzenoid PH-based singlet biradicaloids. Other factors, such as structural flexibility of the biradical and quinoid resonance forms and the participation of the substitution in the π-conjugation, also influence the biradical character. These molecular materials demonstrate a number of unique properties such as near-infrared absorption, redox amphotericity, large two-photon absorption cross section, short excited state lifetime, stimuli-responsive magnetic activity, and singlet fission, which suggests promise for future applications.
Here we present the 15 pseudochromosomes of sweet potato, Ipomoea batatas, the seventh most important crop in the world and the fourth most significant in China. By using a novel haplotyping method based on genome assembly, we have produced a half haplotype-resolved genome from ~296 Gb of paired-end sequence reads amounting to roughly 67-fold coverage. By phylogenetic tree analysis of homologous chromosomes, it was possible to estimate the time of two recent whole-genome duplication events as occurring about 0.8 and 0.5 million years ago. This half haplotype-resolved hexaploid genome represents the first successful attempt to investigate the complexity of chromosome sequence composition directly in a polyploid genome, using sequencing of the polyploid organism itself rather than any of its simplified proxy relatives. Adaptation and application of our approach should provide higher resolution in future genomic structure investigations, especially for similarly complex genomes.
Polycyclic aromatic hydrocarbons with an open-shell singlet biradical ground state are of fundamental interest and have potential applications in materials science. However, the inherent high reactivity makes their synthesis and characterization very challenging. In this work, a convenient synthetic route was developed to synthesize two kinetically blocked heptazethrene (HZ-TIPS) and octazethrene (OZ-TIPS) compounds with good stability. Their ground-state electronic structures were systematically investigated by a combination of different experimental methods, including steady-state and transient absorption spectroscopy, variable temperature NMR, electron spin resonance (ESR), superconducting quantum interfering device (SQUID), FT Raman, and X-ray crystallographic analysis, assisted by unrestricted symmetry-broken density functional theory (DFT) calculations. All these demonstrated that the heptazethrene derivative HZ-TIPS has a closed-shell ground state while its octazethrene analogue OZ-TIPS with a smaller energy gap exists as an open-shell singlet biradical with a large measured biradical character (y = 0.56). Large two-photon absorption (TPA) cross sections (σ((2))) were determined for HZ-TIPS (σ((2))(max) = 920 GM at 1250 nm) and OZ-TIPS (σ((2))(max) = 1200 GM at 1250 nm). In addition, HZ-TIPS and OZ-TIPS show a closely stacked 1D polymer chain in single crystals.
Discrete graphitic carbon compounds serve as tunable models for the properties of extended macromolecular structures such as nanotubes. Here, we report synthesis and characterization of a cylindrical C304H264molecule composed of 40 benzene (phenine) units mutually bonded at the 1, 3, and 5 positions. The concise nine-step synthesis featuring successive borylations and couplings proceeded with an average yield for each benzene-benzene bond formation of 91%. The molecular structure of the nanometer-sized cylinder with periodic vacancy defects was confirmed spectroscopically and crystallographically. The nanoporous nature of the compound further enabled inclusion of multiple fullerene guests. Computations suggest that fusing many such cylinders could produce carbon nanotubes with electronic properties modulated by the periodic vacancy defects.
Polycyclic aromatic hydrocarbons (PAHs) with unpaired or partially unpaired electrons will display open-shell radical character (monoradical, biradical, polyradical). This will lead to special features in electronic structures, magnetic properties and crystalline packing, which endow them with great potential as a new generation of materials. Stability issues are always the focus on the way towards functionalized open-shell PAHs, and chemists have made huge endeavours in synthesizing stable PAHs with open-shell characters. In this article, we summarize recent developments on open-shell PAHs covering both theoretical advances and experimental progresses, and touch on a few examples of them for practical applications.
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