Modern humans have occupied almost all possible environments globally since exiting Africa about 100,000 years ago. Both behavioral and biological adaptations have contributed to their success in surviving the rigors of climatic extremes, including cold, strong ultraviolet radiation, and high altitude. Among these environmental stresses, high-altitude hypoxia is the only condition in which traditional technology is incapable of mediating its effects. Inhabiting at >3,000-m high plateau, the Tibetan population provides a widely studied example of high-altitude adaptation. Yet, the genetic mechanisms underpinning long-term survival in this environmental extreme remain unknown. We performed an analysis of genome-wide sequence variations in Tibetans. In combination with the reported data, we identified strong signals of selective sweep in two hypoxia-related genes, EPAS1 and EGLN1. For these two genes, Tibetans show unusually high divergence from the non-Tibetan lowlanders (Han Chinese and Japanese) and possess high frequencies of many linked sequence variations as reflected by the Tibetan-specific haplotypes. Further analysis in seven Tibetan populations (1,334 individuals) indicates the prevalence of selective sweep across the Himalayan region. The observed indicators of natural selection on EPAS1 and EGLN1 suggest that during the long-term occupation of high-altitude areas, the functional sequence variations for acquiring biological adaptation to high-altitude hypoxia have been enriched in Tibetan populations.

Myosin VI is a reverse direction myosin motor that, as a dimer, moves processively on actin with an average center-of-mass movement of ϳ30 nm for each step. We labeled myosin VI with a single fluorophore on either its motor domain or on the distal of two calmodulins (CaMs) located on its putative lever arm. Using a technique called FIONA (fluorescence imaging with one nanometer accuracy), step size was observed with a standard deviation of <1.5 nm, with 0.5-s temporal resolution, and observation times of minutes. Irrespective of probe position, the average step size of a labeled head was ϳ60 nm, strongly supporting a hand-over-hand model of motility and ruling out models in which the unique myosin VI insert comes apart. However, the CaM probe displayed large spatial fluctuations (presence of ATP but not ADP or no nucleotide) around the mean position,whereas the motor domain probe did not. This supports a model of myosin VI motility in which the lever arm is either mechanically uncoupled from the motor domain or is undergoing reversible isomerization for part of its motile cycle on actin.The myosin superfamily is composed of 18 classes of molecular motor proteins, the vast majority of which traffic toward the barbed (ϩ) end of actin filaments (1). Class VI myosins were the first of the superfamily identified to traffic toward the pointed (Ϫ) end of the actin filament (2). They were first identified in Drosophila melanogaster (3) and are expressed from Caenorhabditis elegans to human (4 -6). In addition to its unusual directionality, myosin VI has a number of additional unusual features. Single molecules of two-headed myosin VI, like myosin V, are capable of taking multiple steps (processive movement) on an actin filament without detachment (7). However, while myosin V has been demonstrated to move along actin filaments in 36-nm steps using its long lever arm (containing six calmodulins (CaMs) 1 ) via a hand-over-hand mechanism (8 -12), myosin VI does not appear to use a simple lever arm mechanism for its motility (7, 13). Myosin VI has been shown recently to have only two CaMs bound to each head (14), which should result in a short effective lever arm and small step size. Surprisingly, myosin VI has a step size that is highly variable (7) but on average nearly as large as that of myosin V, which has a lever arm that is three times longer. The variability of the step size has led to the postulate that myosin VI contains a long elastic element that allows it to undergo biased diffusion on an actin filament. The elastic element could be attached to the short lever arm, and/or the lever arm itself could become loosely attached to the motor at some point in the motile ATPase cycle. It was initially postulated that the unique insert of 39 amino acids in myosin VI that precedes the IQ motif (CaM-binding site) might come apart to form this flexible linker during the motile cycle on actin (7). This would result in the CaM being significantly displaced from the motor domain.EM images of two-headed myosin V bound to actin s...

Tibetans are well adapted to high-altitude hypoxic conditions, and in recent genome-wide scans, many candidate genes have been reported involved in the physiological response to hypoxic conditions. However, the limited sequence variations analyzed in previous studies would not be sufficient to identify causal mutations. Here we conducted resequencing of the entire genomic region (59.4 kb) of the hypoxic gene EGLN1 (one of the top candidates from the genome-wide scans) in Tibetans and identified 185 sequence variations, including 13 novel variations (12 substitutions and 1 insertion or deletion). There is a nonsynonymous mutation (rs186996510, D4E) showing surprisingly deep divergence between Tibetans and lowlander populations (Fst = 0.709 between Tibetans and Han Chinese). It is highly prevalent in Tibetans (70.9% on average) but extremely rare in Han Chinese, Japanese, Europeans, and Africans (0.56-2.27%), suggesting that it might be the causal mutation of EGLN1 contributing to high-altitude hypoxic adaptation. Neutrality test confirmed the signal of Darwinian positive selection on EGLN1 in Tibetans. Haplotype network analysis revealed a Tibetan-specific haplotype, which is absent in other world populations. The estimated selective intensity (0.029 for the C allele of rs186996510) puts EGLN1 among the known genes that have undergone the strongest selection in human populations, and the onset of selection was estimated to have started at the early Neolithic (∼8,400 years ago). Finally, we detected a significant association between rs186996510 and hemoglobin levels in Tibetans, suggesting that EGLN1 contributes to the adaptively low hemoglobin level of Tibetans compared with acclimatized lowlanders at high altitude.

To identify the structural basis for the observed physiological effects of myosin regulatory light chain phosphorylation in skinned rabbit skeletal muscle fibers (potentiation of force development at low calcium), thick filaments separated from the muscle in the relaxed state, with unphoshorylated light chains, were incubated with specific, intact, myosin light chain kinase at moderate (pCa 5.0) and low (pCa 5.8) calcium and with calcium-independent enzyme in the absence of calcium, then examined as negatively stained preparations, by electron microscopy and optical diffraction. All such experimental filaments became disordered (lost the near-helical array of surface myosin heads typical of the relaxed state). Filaments incubated in control media, including intact enzyme in the absence of calcium, moderate calcium (pCa 5.0) without enzyme, and bovine serum albumin substituting for calcium-independent myosin light chain kinase, all retained their relaxed structure. Finally, filaments disordered by phosphorylation regained their relaxed structure after incubation with a protein phosphatase catalytic subunit. We suggest that the observed disorder is due to phosphorylation-induced increased mobility and/or changed conformation of myosin heads, which places an increased population of them close to thin filaments, thereby potentiating actin-myosin interaction at low calcium levels.

Tibetans live on the highest plateau in the world, their current population size is approximately 5 million, and most of them live at an altitude exceeding 3,500 m. Therefore, the Tibetan Plateau is a remarkable area for cultural and biological studies of human population history. However, the chronological profile of the Tibetan Plateau's colonization remains an unsolved question of human prehistory. To reconstruct the prehistoric colonization and demographic history of modern humans on the Tibetan Plateau, we systematically sampled 6,109 Tibetan individuals from 41 geographic populations across the entire region of the Tibetan Plateau and analyzed the phylogeographic patterns of both paternal (n = 2,354) and maternal (n = 6,109) lineages as well as genome-wide single nucleotide polymorphism markers (n = 50) in Tibetan populations. We found that there have been two distinct, major prehistoric migrations of modern humans into the Tibetan Plateau. The first migration was marked by ancient Tibetan genetic signatures dated to approximately 30,000 years ago, indicating that the initial peopling of the Tibetan Plateau by modern humans occurred during the Upper Paleolithic rather than Neolithic. We also found evidences for relatively young (only 7-10 thousand years old) shared Y chromosome and mitochondrial DNA haplotypes between Tibetans and Han Chinese, suggesting a second wave of migration during the early Neolithic. Collectively, the genetic data indicate that Tibetans have been adapted to a high altitude environment since initial colonization of the Tibetan Plateau in the early Upper Paleolithic, before the last glacial maximum, followed by a rapid population expansion that coincided with the establishment of farming and yak pastoralism on the Plateau in the early Neolithic.

Myosin X has features not found in other myosins. Its structure must underlie its unique ability to generate filopodia, which are essential for neuritogenesis, wound healing, cancer metastasis and some pathogenic infections. By determining high-resolution structures of key components of this motor, and characterizing the in vitro behaviour of the native dimer, we identify the features that explain the myosin X dimer behaviour. Single-molecule studies demonstrate that a native myosin X dimer moves on actin bundles with higher velocities and takes larger steps than on single actin filaments. The largest steps on actin bundles are larger than previously reported for artificially dimerized myosin X constructs or any other myosin. Our model and kinetic data explain why these large steps and high velocities can only occur on bundled filaments. Thus, myosin X functions as an antiparallel dimer in cells with a unique geometry optimized for movement on actin bundles.

Phosphorylation of the myosin regulatory light chains (RLCs) activates contraction in smooth muscle and modulates force production in striated muscle. RLC phosphorylation changes the net charge in a critical region of the N terminus and thereby may alter interactions between the RLC and myosin heavy chain. A series of N-terminal charge mutations in the human smooth muscle RLC has been engineered, and the mutants have been evaluated for their ability to mimic the phosphorylated form of the RLC when reconstituted into scallop striated muscle bundles or into isolated smooth muscle myosin. Changing the net charge in the region from Arg-13 to Ser-19 potentiates force in scallop striated muscle and maintains smooth muscle myosin in an unfolded framentous state without affecting ATPase activity or motility of smooth muscle myosin.Thus, the effect of RLC phosphorylation in striated muscle and its ability to regulate the folded-'to-extended conformational transition in smooth muscle may be due to a simple reduction of net charge at the N terminus of the light chain. The ability of phosphorylation to regulate smooth muscle myosin's ATPase activity and motility involves a more complex mechanism.

Although myosin VI has properties that would allow it to function optimally as a dimer, full-length myosin VI exists as a monomer in isolation. Based on the ability of myosin VI monomers to dimerize when held in close proximity, we postulated that cargo binding normally regulates dimerization of myosin VI. We tested this hypothesis by expressing a known dimeric cargo adaptor protein of myosin VI, optineurin, and the myosin VI-binding segment from a monomeric cargo adaptor protein, Dab2. In the presence of these adaptor proteins, full-length myosin VI has ATPase properties of a dimer, appears as a dimer in electron micrographs, and moves processively on actin filaments. The results support a model in which cargo binding exposes internal dimerization sequences within full-length myosin VI. Because, unexpectedly, a monomeric fragment of Dab2 triggers dimerization, it would appear that myosin VI is designed to function as a dimer in cells.Dab2 ͉ directionality ͉ motility ͉ optineurin ͉ unconventional myosin W ithin the myosin superfamily there are at least 35 classes of molecular motors that move along actin filaments (1). Myosin VI is the only class of myosin known to move toward the minus-end of actin filaments (2, 3). Myosin VI dimers take large and variable steps on actin (average of 30-36 nm) using a short lever arm and a unique lever arm extension (4-6). Not only is the myosin VI dimer capable of processive movement (i.e., can move as a single molecule) along an actin filament (4-6), it also functions as a load-dependent actin anchoring protein (7). Thus myosin VI can potentially fulfill a number of specialized cell biological functions (8-10). Paradoxically, although these functional features suggest that myosin VI is designed to work in cells as a dimer, myosin VI as isolated from cells is a monomer, and expressed full-length myosin VI is also monomeric (4,5,11).A number of cargo adaptor proteins that recruit myosin VI have been identified (8). For example, it has been demonstrated that optineurin is essential for myosin VI localization to the Golgi complex (12), and binds to a site within the globular tail of myosin VI. Dab2 (13,14) and Sap97 (15) mediate the recruitment of myosin VI to clathrin-coated pits and vesicles, whereas GipC serves this role on uncoated vesicles (16,17).The myosin VI molecule has discrete structural domains, as diagrammed in Fig. 1, using the terminology of Spink et al. (18). We have demonstrated that internal dimerization (probably coiled coil) occurs between residues 913 and 936 (6). However, we noted that this dimerization is weak and forms only if the molecules are held in close proximity (5, 6). We postulated that in vivo dimerization is initiated upon binding of myosin VI to a dimeric cargo, which would then trigger the weak internal dimerization (5, 6).Subsequently, it was shown that a headless myosin VI construct containing the entire tail and cargo-binding domains dimerized with relatively high affinity (18). Thus there may be two separate regions of the myosin VI molecule...