Climate change and catastrophic events have contributed to rice shortages in several regions due to decreased water availability and soil salinization. Although not adapted to salt or drought stress, two commercial rice varieties achieved tolerance to these stresses by colonizing them with Class 2 fungal endophytes isolated from plants growing across moisture and salinity gradients.Plant growth and development, water usage, ROS sensitivity and osmolytes were measured with and without stress under controlled conditions.The endophytes conferred salt, drought and cold tolerance to growth chamber and greenhouse grown plants. Endophytes reduced water consumption by 20–30% and increased growth rate, reproductive yield, and biomass of greenhouse grown plants. In the absence of stress, there was no apparent cost of the endophytes to plants, however, endophyte colonization decreased from 100% at planting to 65% compared to greenhouse plants grown under continual stress (maintained 100% colonization).These findings indicate that rice plants can exhibit enhanced stress tolerance via symbiosis with Class 2 endophytes, and suggest that symbiotic technology may be useful in mitigating impacts of climate change on other crops and expanding agricultural production onto marginal lands.

One prediction of the novel weapons hypothesis (NWH) for the dominance of exotic invasive plant species is that the allelopathic effects of successful invaders will, in general, be more biochemically inhibitory to native species and microbes in invaded regions than the native plants themselves. However, no study has compared biochemical concentrations, compositions, or effects of large numbers of native species to those of large numbers of invasive species. In this context we tested the allelopathic and antimicrobial potentials of nine native plant species and nine invasive species in East Asia by comparing their broad phenolic contents and the effects of extracts made from each of the species on target plants and soil fungi. Three of the invasive species, including Eupatorium rugosum, had higher concentrations of total phenolic compounds than any of the native species, and the mean concentration of total phenolics for invasive species was 2.6 times greater than the mean for native species. Only scopoletin was novel to the invasive species, being found in all of nine invasive species, but not in the native species. More importantly, the effects of the total suites of phenolic compounds produced by invasive species differed from the effects of phenolics produced by natives. Extracts of invasive species reduced radicle growth of the three test plant species by 60-80%, but extracts of native species reduced radicle growth by only 30-50%. Extracts of invasive species reduced shoot growth of the three test species by 20-40%, but the overall effect of native species' extract was to stimulate shoot growth. The antimicrobial activity of invasive species was also significantly higher than that of native species. It should be noted that phenolics are just one component of a plant's potential allelopathic arsenal and non-phenolic compounds are likely to play a role in the total extract effect. For example, extracts of P. americana contained the lowest levels of phenolic compounds, but exhibited the strongest inhibition effect. We could not determine whether the greater inhibitory effects of the extracts from invasive species were due to novel combinations of chemicals or higher concentrations of chemicals, but our results are consistent with the predictions of the NWH.

The growth and development of rice (Oryzae sativa) seedlings was shown to be regulated epigenetically by a fungal endophyte. In contrast to un-inoculated (nonsymbiotic) plants, endophyte colonized (symbiotic) plants preferentially allocated resources into root growth until root hairs were well established. During that time symbiotic roots expanded at five times the rate observed in nonsymbiotic plants. Endophytes also influenced sexual reproduction of mature big sagebrush (Artemisia tridentata) plants. Two spatially distinct big sagebrush subspecies and their hybrids were symbiotic with unique fungal endophytes, despite being separated by only 380 m distance and 60 m elevation. A double reciprocal transplant experiment of parental and hybrid plants, and soils across the hybrid zone showed that fungal endophytes interact with the soils and different plant genotypes to confer enhanced plant reproduction in soil native to the endophyte and reduced reproduction in soil alien to the endophyte. Moreover, the most prevalent endophyte of the hybrid zone reduced the fitness of both parental subspecies. Because these endophytes are passed to the next generation of plants on seed coats, this interaction provides a selective advantage, habitat specificity, and the means of restricting gene flow, thereby making the hybrid zone stable, narrow and potentially leading to speciation.