Hydrogen has been hailed as a clean and sustainable alternative to finite fossil fuels in many energy systems. Water splitting is an important method for hydrogen production in high purity and large quantities. To accelerate the hydrogen evolution reaction (HER) rate, it is highly necessary to develop high efficiency catalysts and to select a proper electrolyte. Herein, the performances of non-noble metal-based carbon composites under various pH values (acid, alkaline and neutral media) for HER in terms of catalyst synthesis, structure and molecular design are systematically discussed. A detailed analysis of the structure-activity-pH correlations in the HER process gives an insight on the origin of the pH-dependence for HER, and provide guidance for future HER mechanism studies on non-noble metal-based carbon composites. Furthermore, this Review gives a fresh impetus to rational design of high-performance noble-metal-free composites catalysts and guide researchers to employ the established electrocatalysts in proper water electrolysis technologies.

The RON receptor tyrosine kinase is a member of the MET proto-oncogene family that has been implicated in regulating motile-invasive phenotypes in certain types of epithelial cancers. The purpose of this study was to determine if RON expression is altered in primary human colorectal adenocarcinomas. Results from immunohistochemical staining showed that RON is highly expressed in the majority of colorectal adenocarcinomas (29/49 cases). Accumulated RON is also constitutively active with autophosphorylation in tyrosine residues. Moreover, three splicing variants of RON, namely ROND165, ROND160, and ROND155 were detected and cloned from two primary colon cancer samples. These RON variants were generated by deletions in different regions in extracellular domains of the RON b chain. Functional studies showed that expression of ROND160 or ROND155 in MartinDarby canine kidney cells resulted in increased cell dissociation (scatter-like activity). RON variants, ROND160 and ROND155, also exerted the ability to induce multiple focus formation and sustain anchorageindependent growth of transfected NIH3T3 cells. Moreover, NIH3T3 cells expressing ROND160 or ROND155 formed tumors in athymic nude mice and colonized in the lungs. These data suggest that RON expression is altered in certain primary colon cancers. Abnormal accumulation of RON variants may play a role in the progression of certain colorectal cancers in vivo.

Developing novel and efficient catalysts is always an important theme for heterogeneous catalysis from fundamental and applied research points of view. In the past, carbon materials were used as supports for numerous heterogeneous catalysts because of their fascinating properties including high surface areas, tunable porosity, and functionality. Recently, the newly emerging N-doped carbon-supported metal catalysts have arguably experienced great progress and brought the most attention over the last decades in view of the fact that nitrogen doping can tailor the properties of carbon for various applications of interest. Compared with pristine carbon-supported metal catalysts, these catalysts normally show superior catalytic performance in many heterogeneous catalytic reactions because of the introduced various metal–support interactions from N doping. In this Perspective, we focus on the fabrication methods for N-doped carbon-supported metal catalysts and the catalytic application of these fascinating catalysts in several industrially relevant reactions, including hydrogenation, dehydrogenation, oxidation, and coupling. Notably, we try to elucidate the structure–activity correlations obtained from theoretical calculation, extensive characterization, and observed catalytic performances, thereby providing guidance for the rational design of advanced catalysts for heterogeneous catalysis.

In addition to storage of genetic information, DNA can also catalyze various reactions. RNA-cleaving DNAzymes are the catalytic DNAs discovered the earliest, and they can cleave RNAs in a sequence-specific manner. Owing to their great potential in medical therapeutics, virus control, and gene silencing for disease treatments, RNA-cleaving DNAzymes have been extensively studied; however, the mechanistic understandings of their substrate recognition and catalysis remain elusive. Here, we report three catalytic form 8–17 DNAzyme crystal structures. 8–17 DNAzyme adopts a V-shape fold, and the Pb2+ cofactor is bound at the pre-organized pocket. The structures with Pb2+ and the modification at the cleavage site captured the pre-catalytic state of the RNA cleavage reaction, illustrating the unexpected Pb2+-accelerated catalysis, intrinsic tertiary interactions, and molecular kink at the active site. Our studies reveal that DNA is capable of forming a compacted structure and that the functionality-limited bio-polymer can have a novel solution for a functional need in catalysis.

The research of a robust catalytic system based on single NiO electrocatalyst for hydrogen evolution reaction (HER) remains a huge challenge. Particularly, the factors that dominate the catalytic properties of NiO-based hybrids for HER have not been clearly demonstrated. Herein, a convenient protocol for the fabrication of NiO@bamboo-like carbon nanotube hybrids (NiO@BCNTs) is designed. The hybrids exhibit superb catalytic ability and considerable durability in alkaline solution. A benchmark HER current density of 10 mA cm has been achieved at an overpotential of ∼79 mV. In combination with the experimental results and density functional theory (DFT) calculations, this for the first time definitely validates that the inherent high Ni ratio and the Ni on the interface of Ni/NiO play a vital role in the outstanding catalytic performance. Especially, the Ni on the interface of Ni/NiO performs superior activity for water splitting compared with that of bulk Ni. These conclusions provide guidance for the rational design of the future non-noble metallic catalysts.

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MotivationAccurate identification of peptides binding to specific Major Histocompatibility Complex Class II (MHC-II) molecules is of great importance for elucidating the underlying mechanism of immune recognition, as well as for developing effective epitope-based vaccines and promising immunotherapies for many severe diseases. Due to extreme polymorphism of MHC-II alleles and the high cost of biochemical experiments, the development of computational methods for accurate prediction of binding peptides of MHC-II molecules, particularly for the ones with few or no experimental data, has become a topic of increasing interest. TEPITOPE is a well-used computational approach because of its good interpretability and relatively high performance. However, TEPITOPE can be applied to only 51 out of over 700 known HLA DR molecules.MethodWe have developed a new method, called TEPITOPEpan, by extrapolating from the binding specificities of HLA DR molecules characterized by TEPITOPE to those uncharacterized. First, each HLA-DR binding pocket is represented by amino acid residues that have close contact with the corresponding peptide binding core residues. Then the pocket similarity between two HLA-DR molecules is calculated as the sequence similarity of the residues. Finally, for an uncharacterized HLA-DR molecule, the binding specificity of each pocket is computed as a weighted average in pocket binding specificities over HLA-DR molecules characterized by TEPITOPE.ResultThe performance of TEPITOPEpan has been extensively evaluated using various data sets from different viewpoints: predicting MHC binding peptides, identifying HLA ligands and T-cell epitopes and recognizing binding cores. Among the four state-of-the-art competing pan-specific methods, for predicting binding specificities of unknown HLA-DR molecules, TEPITOPEpan was roughly the second best method next to NETMHCIIpan-2.0. Additionally, TEPITOPEpan achieved the best performance in recognizing binding cores. We further analyzed the motifs detected by TEPITOPEpan, examining the corresponding literature of immunology. Its online server and PSSMs therein are available at http://www.biokdd.fudan.edu.cn/Service/TEPITOPEpan/.

Porous nitrogen-doped graphene layers encapsulating cobalt nanoparticles (NPs) were prepared by the direct pyrolysis process. The resulting hybrids catalyze the hydrogenation of diverse quinoline compounds to access the corresponding tetrahydro derivatives (THQs), important molecules present in fine and bulk chemicals. Near-quantitative yields of the corresponding THQs were obtained under optimized conditions. Notably, various useful substituted quinolines and other biologically important N-heteroarenes are also viable. The enhanced stability of the catalyst is ascribed to the encapsulation structure, which can enormously reduce the extent of leaching of base metals and protect metal NPs from growing larger. The achieved success in the encapsulation of metal NPs within graphene layers opens an avenue for the design of highly active and reusable heterogeneous catalysts for more challenging molecules.