Age-related alterations of functional brain networks contribute to cognitive decline. Current theories indicate that age-related intrinsic brain functional reorganization may be a critical marker of cognitive aging. Yet, little is known about how intrinsic interhemispheric functional connectivity changes with age in adults, and how this relates to critical executive functions. To address this, we examined voxel-mirrored homotopic connectivity (VMHC), a metric that quantifies interhemispheric communication, in 93 healthy volunteers (age range: 19-85) with executive function assessment using the Delis-Kaplan Executive Function System (D-KEFS) scales. Resting functional MRI data were analyzed to assess VMHC, and then a multiple linear regression model was employed to evaluate the relationship between age and the whole-brain VMHC. We observed age-related reductions in VMHC of ventromedial prefrontal cortex (vmPFC) and hippocampus in the medial temporal lobe subsystem, dorsal anterior cingulate cortex and insula in salience network, and inferior parietal lobule in frontoparietal control network. Performance on the color-word inhibition task was associated with VMHC of vmPFC and insula, and VMHC of vmPFC mediated the relationship between age and CWIT inhibition reaction times. The percent ratio of correct design scores in design fluency test correlated positively with VMHC of the inferior parietal lobule. The current study suggests that brain interhemispheric functional alterations may be a promising new avenue for understanding age-related cognitive decline.
Eating behaviors are closely related to body weight, and eating traits are depicted in three dimensions: dietary restraint, disinhibition, and hunger. The current study aims to explore whether these aspects of eating behaviors are related to intrinsic brain activation, and to further investigate the relationship between the brain activation relating to these eating traits and body weight, as well as the link between function connectivity (FC) of the correlative brain regions and body weight. Our results demonstrated positive associations between dietary restraint and baseline activation of the frontal and the temporal regions (i.e., food reward encoding) and the limbic regions (i.e., homeostatic control, including the hypothalamus). Disinhibition was positively associated with the activation of the frontal motivational system (i.e., OFC) and the premotor cortex. Hunger was positively related to extensive activations in the prefrontal, temporal, and limbic, as well as in the cerebellum. Within the brain regions relating to dietary restraint, weight status was negatively correlated with FC of the left middle temporal gyrus and left inferior temporal gyrus, and was positively associated with the FC of regions in the anterior temporal gyrus and fusiform visual cortex. Weight status was positively associated with the FC within regions in the prefrontal motor cortex and the right ACC serving inhibition, and was negatively related with the FC of regions in the frontal cortical-basal ganglia-thalamic circuits responding to hunger control. Our data depicted an association between intrinsic brain activation and dietary restraint, disinhibition, and hunger, and presented the links of their activations and FCs with weight status.
The accurate weed detection is the premise for precision prevention and control of weeds in fields. Machine vision offers an effective means to detect weeds accurately. For precision detection of various weeds in carrot fields, this paper improves You Only Look Once v4 (YOLO v4) into a lightweight weed detection model called YOLO v4-weeds for the weeds among carrot seedlings. Specifically, the backbone network of the original YOLOv4 was replaced with MobileNetV3-Small. Combined with depth-wise separable convolution and inverted residual structure, a lightweight attention mechanism was introduced to reduce the memory required to process images, making the detection model more efficient. The research results provide a reference for the weed detection, robot weeding, and selective spraying.
Understanding intra-molecular coevolution helps to elucidate various structural and functional constraints acting on molecules and might have practical applications in predicting molecular structure and interactions. In this study, we used 5S rRNA as a template to investigate how selective constraints have shaped the RNA evolution. We have observed the nonrandom occurrence of paired differences along the phylogenetic trees, the high rate of compensatory evolution, and the high TIR scores (the ratio of the numbers of terminal to intermediate states), all of which indicate that significant positive selection has driven the evolution of 5S rRNA. We found three mechanisms of compensatory evolution: Watson-Crick interaction (the primary one), complex interactions between multiple sites within a stem, and interplay of stems and loops. Coevolutionary interactions between sites were observed to be highly dependent on the structural and functional environment in which they occurred. Coevolution occurred mostly in those sites closest to loops or bulges within structurally or functionally important helices, which may be under weaker selective constraints than other stem positions. Breaking these pairs would directly increase the size of the adjoining loop or bulge, causing a partial or total structural rearrangement. In conclusion, our results indicate that sequence coevolution is a direct result of maintaining optimal structural and functional integrity.
This paper attempts to design an automated, efficient and intelligent tomato grading method that facilitates the graded selling of the fruit. Based on machine vision, the color images of tomatoes with different morphologies were studied, and the color, shape and size were selected as the key features. On this basis, an automated grading classifier was created based on the surface features of tomatoes, and a grading platform was set up to verify the effect of the classifier. Specifically, the Hue value distributions of tomatoes with different maturities were investigated, and the Hue value ranges were determined for mature, semi-mature and immature tomatoes, producing the color classifier. Next, the first-order Fourier descriptor ( 1D- FD ) was adopted to describe the radius sequence of tomato contour, and an equation was established to compute the irregularity of tomato contour, creating the shape classifier. After that, a linear regression equation was constructed to reflect the relationship between the transverse diameters of actual tomatoes and tomato images, and a classifier between large, medium and small tomatoes was produced based on the transverse diameter. Finally, a comprehensive tomato classifier was built based on the color, shape and size diameters. The experimental results show that the mean grading accuracy of the proposed method was 90.7%. This means our method can achieve automated real-time grading of tomatoes.
BackgroundSeveral biclustering algorithms have been proposed to identify biclusters, in which genes share similar expression patterns across a number of conditions. However, different algorithms would yield different biclusters and further lead to distinct conclusions. Therefore, some testing and comparisons between these algorithms are strongly required.MethodsIn this study, five biclustering algorithms (i.e. BIMAX, FABIA, ISA, QUBIC and SAMBA) were compared with each other in the cases where they were used to handle two expression datasets (GDS1620 and pathway) with different dimensions in Arabidopsis thaliana (A. thaliana)GO (gene ontology) annotation and PPI (protein-protein interaction) network were used to verify the corresponding biological significance of biclusters from the five algorithms. To compare the algorithms’ performance and evaluate quality of identified biclusters, two scoring methods, namely weighted enrichment (WE) scoring and PPI scoring, were proposed in our study. For each dataset, after combining the scores of all biclusters into one unified ranking, we could evaluate the performance and behavior of the five biclustering algorithms in a better way.ResultsBoth WE and PPI scoring methods has been proved effective to validate biological significance of the biclusters, and a significantly positive correlation between the two sets of scores has been tested to demonstrate the consistence of these two methods.A comparative study of the above five algorithms has revealed that: (1) ISA is the most effective one among the five algorithms on the dataset of GDS1620 and BIMAX outperforms the other algorithms on the dataset of pathway. (2) Both ISA and BIMAX are data-dependent. The former one does not work well on the datasets with few genes, while the latter one holds well for the datasets with more conditions. (3) FABIA and QUBIC perform poorly in this study and they may be suitable to large datasets with more genes and more conditions. (4) SAMBA is also data-independent as it performs well on two given datasets. The comparison results provide useful information for researchers to choose a suitable algorithm for each given dataset.
Based on the hyperspectral imaging (HSI) technique, this paper attempts to test the saccharinity of three varieties of cherry tomatoes in a nondestructive manner. The cherry tomato samples of the three varieties were collected, and kept at room temperature for 12h. Then, the spectral curves of the samples were obtained between the wavelengths of 914.91nm and 1,661.91nm. After that, the feature bands were extracted by three algorithms, namely, competitive adaptive reweighted sampling (CARS), successive projection algorithm (SPA) and SPA-CARS. The samples were divided into a correction dataset and a prediction dataset at the ratio of 2:1. Next, the feature bands extracted by the three algorithms were combined with the partial least squares (PLS) and least squares-support vector machine (LS-SVM) into six saccharinity prediction models. Finally, the prediction results of the six models were compared, revealing that the CARS-LS-SVM achieved the best performance with a prediction accuracy of >92%. The evaluation indices of this model are as follows: the correlation coefficient of correction dataset (R), 0.9696; the correlation coefficient of prediction dataset (R), 0.9220; the root mean square error of correction dataset (RMSEC), 0.2768; the root mean square error of prediction dataset (RMSEP), 0.4390. The research results lay the basis for industrial grading of saccharinity of cherry tomatoes in a nondestructive manner.
We study the dynamics of adaptation in asexual populations that undergo both beneficial and deleterious mutations. In particular, how the deleterious mutations affect the fixation of beneficial mutations was investigated. Using extensive Monte Carlo simulations, we find that in the “strong-selection weak mutation (SSWM)” regime or in the “clonal interference (CI)” regime, deleterious mutations rarely influence the distribution of “selection coefficients of the fixed mutations (SCFM)”; while in the “multiple mutations” regime, the accumulation of deleterious mutations would lead to a decrease in fitness significantly. We conclude that the effects of deleterious mutations on adaptation depend largely on the supply of beneficial mutations. And interestingly, the lowest adaptation rate occurs for a moderate value of selection coefficient of deleterious mutations.
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