Flax has been cultivated for its oil and fiber for thousands of years. However, it remains unclear how the modifications of agronomic traits occurred on the genetic level during flax cultivation. In this study, we conducted genome-wide variation analyses on multiple accessions of oil-use, fiber-use, landraces, and pale flax to identify the genomic variations during flax cultivation. Our findings indicate that, during flax domestication, genes relevant to flowering, dehiscence, oil production, and plant architecture were preferentially selected. Furthermore, regardless of origins, the improvement of the modern oil-use flax preceded that of the fiber-use flax, although the dual selection on oil-use and fiber-use characteristics might have occurred in the early flax domestication. We also found that the expansion of MYB46/MYB83 genes may have contributed to the unique secondary cell wall biosynthesis in flax and the directional selections on MYB46/ MYB83 may have shaped the morphological profile of the current oil-use and fiber-use flax.
Flaxseed, which is rich in lignan, α-linolenic acid, dietary fiber, and several minerals, is an important food and nutrition source. In this study, trials were conducted at Yongdeng over two consecutive years (2018 and 2019), with three cultivars (Longyaza 1, Longya 14, and Zhangya 2) and five application rates of phosphorus (P) (0, 40, 80, 120, and 160 kg P2O5 ha−1). We examined the effects of P on the seed yield, and the yields and contents of dietary fiber, lignan, iron (Fe), zinc (Zn), manganese (Mn), and copper (Cu). We found that P fertilization positively influenced yields of seed and levels of lignan, Fe, and Cu, showing average increases of 15, 20, 24, and 28%, respectively, compared with plants not given P over the 2-year study. Additionally, P fertilization resulted in increased concentrations of Fe and Cu in flaxseed of 8 and 2%, respectively. P fertilization negatively affected the levels of dietary fiber, Zn, and Mn, which were reduced by 7, 11, and 7%, respectively, in comparison with the control. In conclusion, the results demonstrated that appropriate P application is an effective strategy for improving yields of seed, lignan, Fe, and Cu in flax production and for enhancing concentrations of Fe and Cu in flax.
Auxin response factors (ARFs) are critical components of the auxin signaling pathway, and are involved in diverse plant biological processes. However, ARF genes have not been investigated in flax (Linum usitatissimum L.), an important oilseed and fiber crop. In this study, we comprehensively analyzed the ARF gene family and identified 33 LuARF genes unevenly distributed on the 13 chromosomes of Longya-10, an oil-use flax variety. Detailed analysis revealed wide variation among the ARF family members and predicted nuclear localization for all proteins. Nineteen LuARFs contained a complete ARF structure, including DBD, MR, and CTD, whereas the other fourteen lacked the CTD. Phylogenetic analysis grouped the LuARFs into four (I–V) clades. Combined with sequence analysis, the LuARFs from the same clade showed structural conservation, implying functional redundancy. Duplication analysis identified twenty-seven whole-genome-duplicated LuARF genes and four tandem-duplicated LuARF genes. These duplicated gene pairs’ Ka/Ks ratios suggested a strong purifying selection pressure on the LuARF genes. Collinearity analysis revealed that about half of the LuARF genes had homologs in other species, indicating a relatively conserved nature of the ARFs. The promoter analysis identified numerous hormone- and stress-related elements, and the qRT-PCR experiment revealed that all LuARF genes were responsive to phytohormone (IAA, GA3, and NAA) and stress (PEG, NaCl, cold, and heat) treatments. Finally, expression profiling of LuARF genes in different tissues by qRT-PCR indicated their specific functions in stem or capsule growth. Thus, our findings suggest the potential functions of LuARFs in flax growth and response to an exogenous stimulus, providing a basis for further functional studies on these genes.
Tools quantifying phosphorus (P) status in plants help to achieve efficient management and to optimize crop yield. The objectives of this study were to establish the relationship between P and nitrogen (N) concentrations of flax (Linum usitatissimum L.) during the growth season to determine the critical P concentration for diagnosing P deficiency. Field experiments were arranged as split plots based on a randomized complete block design. Phosphorus levels (0, 40, 80, 120, and 160 kgP2O5 ha−1) were assigned to the main plots, and cultivars (Dingya 22, Lunxuan 2, Longyaza 1, Zhangya 2, and Longya 14) were allocated to the subplots. Shoot biomass (SB) and P and N concentrations were determined at 47, 65, 74, 98, and 115 days after emergence. Shoot biomass increased, while P and N concentrations and the N:P ratio declined with time in each year. The P concentration in respect of N concentration was described using a liner relationship (P = 0.05, N + 1.68, R2 = 0.76, p < 0.01) under non-limiting P conditions, in which the concentrations are expressed in g kg−1 dry matter (DM). The N:P ratio was fitted to a second-order polynomial equation (N:P = 11.56 × SB−0.1, R2 = 0.71, p = 0.03), based on the SB of flax. This research first developed a predictive model for critical P concentration in flax, as a function of N concentration in shoots of flax. The critical P concentration can be used as a promising alternative tool to quantify the degree of P deficiency of flax during the current growing season.
Seeds of flax (Linum usitatissimum L.) are highly rich in both oil and linolenic acid (LIN). It is crucial for flax agricultural production to identify positive regulators of fatty acid biosynthesis. In this study, we find that WRINKLED1 transcription factors play important positive roles during flax seed oil accumulation. Two WRINKLED1 genes, LuWRI1a and LuWRI1b, were cloned from flax, and LuWRI1a was found be expressed predominantly in developing seeds during maturation. Overexpression of LuWRI1a increased seed size, weight, and oil content in Arabidopsis and increased seed storage oil content in transgenic flax without affecting seed production or seed oil quality. The rise in oil content in transgenic flax seeds was primarily attributable to the increase in seed weight, according to a correlational analysis. Furthermore, overexpression or interference of LuWRI1a upregulated the expression of genes in the fatty acid biosynthesis pathway and LAFL genes, and the expression level of WRI1 was highly significantly positively associated between L1L, LEC1, and BCCP2. Our findings give a theoretical scientific foundation for the future application of genetic engineering to enhance the oil content of plant seeds.
Flax is a dual-purpose crop that is important for oil and fiber production. The growth habit is one of the crucial targets of selection during flax domestication. Wild hybridization between cultivated flax and wild flax can produce superior germplasms for flax breeding and facilitate the study of the genetic mechanism underlying agronomically important traits. In this study, we used pale flax, Linum grandiflorum, and L. perenne to pollinate Longya-10. Only pale flax interspecific hybrids were obtained, and the trait analysis of the F1 and F2 generations showed that the traits analyzed in this study exhibited disparate genetic characteristics. In the F1 generation, only one trait, i.e., the number of capsules per plant (140) showed significant heterosis, while the characteristics of other traits were closely associated with those of the parents or a decline in hybrid phenotypes. The traits of the F2 generation were widely separated, and the variation coefficient ranged from 9.96% to 146.15%. The quantitative trait locus underlying growth habit was preliminarily found to be situated on chromosome 2 through Bulked-segregant analysis sequencing. Then linkage mapping analysis was performed to fine-map GH2.1 to a 23.5-kb interval containing 4 genes. Among them, L.us.o.m.scaffold22.109 and L.us.o.m.scaffold22.112 contained nonsynonymous SNPs with Δindex=1. Combined with the qRT-PCR results, the two genes might be possible candidate genes for GH2.1. This study will contribute to the development of important germplasms for flax breeding, which would facilitate the elucidation of the genetic mechanisms regulating the growth habit and development of an ideal architecture for the flax plant.
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