N6-methyladenosine (m6A) is a prevalent RNA methylation modification involved in the regulation of degradation, subcellular localization, splicing and local conformation changes of RNA transcripts. High-throughput experiments have demonstrated that only a small fraction of the m6A consensus motifs in mammalian transcriptomes are modified. Therefore, accurate identification of RNA m6A sites becomes emergently important. For the above purpose, here a computational predictor of mammalian m6A site named SRAMP is established. To depict the sequence context around m6A sites, SRAMP combines three random forest classifiers that exploit the positional nucleotide sequence pattern, the K-nearest neighbor information and the position-independent nucleotide pair spectrum features, respectively. SRAMP uses either genomic sequences or cDNA sequences as its input. With either kind of input sequence, SRAMP achieves competitive performance in both cross-validation tests and rigorous independent benchmarking tests. Analyses of the informative features and overrepresented rules extracted from the random forest classifiers demonstrate that nucleotide usage preferences at the distal positions, in addition to those at the proximal positions, contribute to the classification. As a public prediction server, SRAMP is freely available at http://www.cuilab.cn/sramp/.
Carbon nanotubes (CNTs) were oxidized with H O , KMnO and HNO . Their physicochemical properties were CNTs hosted manganese residuals, and these surely contributed to cadmium sorption to a yet-undefined extent.
The as-grown CNTs and graphitized CNTs were used as adsorbents to remove 1,2-dichlorobenzene from water. The experiments demonstrate that it takes only 40 min for CNTs to attain equilibrium and the adsorption capacity of asgrown and graphitized CNTs is 30.8 and 28.7 mg/g, respectively, from a 20 mg/l solution. CNTs can be used as adsorbents in a wide pH range of 3-10. Thermodynamic calculations indicate that the adsorption reaction is spontaneous with a high affinity and the adsorption is an endothermic reaction.
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