Using the neutron time-of-flight facility at the Indiana University Cyclotron Facility we have studied (p, n) reactions on the light nuclei Li, ' "B,and ' ' C. Double differential cross sections have been measured between Hi, b=0' and 50' in 5' intervals, at E"=186MeV. Contributions of the quasifree reaction in the giant resonance region are estimated. Energy spectra of EL=1 transitions have been extracted using multipole decomposition analysis. The resulting EL=1 spectra are compared with results of photonuclear reactions.Empirical results are also compared with distorted wave impulse approximation calculations. PACS number(s): 25.40.Ep, 27.20.+n, 24.70.+s
Summary
Two main sources of data for species distribution models (SDMs) are site‐occupancy (SO) data from planned surveys, and presence‐background (PB) data from opportunistic surveys and other sources. SO surveys give high quality data about presences and absences of the species in a particular area. However, due to their high cost, they often cover a smaller area relative to PB data, and are usually not representative of the geographic range of a species. In contrast, PB data is plentiful, covers a larger area, but is less reliable due to the lack of information on species absences, and is usually characterised by biased sampling. Here we present a new approach for species distribution modelling that integrates these two data types.
We have used an inhomogeneous Poisson point process as the basis for constructing an integrated SDM that fits both PB and SO data simultaneously. It is the first implementation of an Integrated SO–PB Model which uses repeated survey occupancy data and also incorporates detection probability.
The Integrated Model's performance was evaluated, using simulated data and compared to approaches using PB or SO data alone. It was found to be superior, improving the predictions of species spatial distributions, even when SO data is sparse and collected in a limited area. The Integrated Model was also found effective when environmental covariates were significantly correlated. Our method was demonstrated with real SO and PB data for the Yellow‐bellied glider (Petaurus australis) in south‐eastern Australia, with the predictive performance of the Integrated Model again found to be superior.
PB models are known to produce biased estimates of species occupancy or abundance. The small sample size of SO datasets often results in poor out‐of‐sample predictions. Integrated models combine data from these two sources, providing superior predictions of species abundance compared to using either data source alone. Unlike conventional SDMs which have restrictive scale‐dependence in their predictions, our Integrated Model is based on a point process model and has no such scale‐dependency. It may be used for predictions of abundance at any spatial‐scale while still maintaining the underlying relationship between abundance and area.
Our study provides the first in vivo and in patient evidence supporting the role of CHD1 in DSB repair and in response to DNA damaging therapy. We uncover mechanistic insights that CHD1 modulates the choice between HR and NHEJ DSB repair and suggest that CHD1 loss may contribute to the genomic instability seen in this subset of PCas.
The partially de-N-acetylated poly--1,6-N-acetyl-D-glucosamine (dPNAG) polymer serves as an intercellular biofilm adhesin that plays an essential role for the development and maintenance of integrity of biofilms of diverse bacterial species. Translocation of dPNAG across the bacterial outer membrane is mediated by a tetratricopeptide repeat-containing outer membrane protein, PgaA. To understand the molecular basis of dPNAG translocation, we determined the crystal structure of the C-terminal transmembrane domain of PgaA (residues 513-807). The structure reveals that PgaA forms a 16-strand transmembrane -barrel, closed by four loops on the extracellular surface. Half of the interior surface of the barrel that lies parallel to the translocation pathway is electronegative, suggesting that the corresponding negatively charged residues may assist the secretion of the positively charged dPNAG polymer. In vivo complementation assays in a pgaA deletion bacterial strain showed that a cluster of negatively charged residues proximal to the periplasm is necessary for biofilm formation. Biochemical analyses further revealed that the tetratricopeptide repeat domain of PgaA binds directly to the N-deacetylase PgaB and is critical for biofilm formation. Our studies support a model in which the positively charged PgaB-bound dPNAG polymer is delivered to PgaA through the PgaA-PgaB interaction and is further targeted to the -barrel lumen of PgaA potentially via a charge complementarity mechanism, thus priming the translocation of dPNAG across the bacterial outer membrane.
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