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The change in the feeding system can greatly improve the growth performance of the yak (Bos grunniens), an important livestock species in the plateau region. Here, we comprehensively compared the effects of different feeding systems on the growth performance and ruminal development of yaks, and investigated the effects of ruminal microorganisms and metabolites using the 16S rRNA gene sequencing and liquid chromatograph–mass spectrometer (LC-MS) technologies. We found that compared to traditional grazing feeding, house feeding significantly improved the growth performance (such as average daily gain and net meat weight) and rumen development of the yaks. At the genus level, the abundance of Rikenellaceae RC9 Gut group, Christensenellaceae R-7 group, Lachnospiraceae NK3A20 group, Ruminococcaceae UCG-014, and Prevotellaceae UCG-003 showed significant differences and was closely related to rumen development in the two distinct feeding systems. Also, metabolomics revealed that the change in the feeding system significantly affected the concentration and metabolic pathways of the related rumen metabolites. The metabolites with significant differences were significantly enriched in purine metabolism (xanthine, adenine, inosine, etc.), tyrosine metabolism (L-tyrosine, dopaquinone, etc.), phenylalanine metabolism (dihydro-3-caumaric acid, hippuric acid, etc.), and cAMP signaling pathway [acetylcholine, (-)-epinephrine, etc.]. This study scientifically support the house fattening feeding system for yaks. Also, our results provide new insights into the composition and function of microbial communities that promote ruminal development and in general growth of the yaks.

Aims Grasslands used for animal husbandry are chosen depending on the nutritive values of dominant herbage species. However, the influence of grazing in combination with precipitation and growing season on the nutritive values of dominant species has not been explicated. Methods To unveil the influence of the different grazing intensities on the nutritional values, an ecological study was formulated, namely fencing (G0), light grazing (G1), moderate grazing (G2) and high grazing (G3). This ambitious study was undertaken on the nutritive values of the four dominant species of herbage in an alpine meadow on the Qinghai-Tibet Plateau (QTP) during growing season (June–September) for two successive years, namely 2015 (rainy year) and 2016 (droughty year). Important Findings We found that (i) the nutritive value of Kobresia capillifolia, Polygonum viviparum and Caragana sinica was noticeably increased by grazing, but negligible effect on Potentilla fruticosa nutritive value was recorded. (ii) During the rainy year (2015), compared with G0, Polygonum viviparum and Potentilla fruticosa displayed 5.4 and 1.5% increases in the crude protein (CP) content and 8.5 and 2.4% increases in vitro true digestibility (IVTD), respectively, while the neutral detergent fibre (NDF) decreased by 13.5 and 0.9%, respectively. During the droughty year (2016), compared with G0, C. sinica and Potentilla fruticosa showed increases in the CP content by 4.3 and 1.3% and increases in the IVTD by 10.7 and 0.4%, respectively, during G3, while the NDF decreased by 6.0 and 1.0%, respectively. (iii) The nutritive values of all species were higher in the years when the rains were good. However, the nutritive values suffered heavily during drought conditions. Besides, the highest and lowest values of nutrition were detected in June and in September, respectively. The inter-seasonal and the inter-annual changes in the nutritional values of species were higher for K. capillifolia and Polygonum viviparum than for Potentilla fruticosa and C. sinica, suggesting that Potentilla fruticosa and C. sinica had higher water-use efficiency. (iv) Grazing clearly reduced the drought tolerance of three species and showed no effects on Potentilla fruticosa. (v) Grazing clearly increased the inter-month variation in the nutritional value of K. capillifolia and Polygonum viviparum but showed no effects on Potentilla fruticosa or C. sinica. Evidently, the grazing effects impacting the nutritional value of the dominant species of herbage exhibited conspicuous inter-annual and seasonal variations with species-specific influences and responses. Our findings are expected to have far-reaching implications enabling the authorities to arrive at strategic decisions and designing of relevant policies for the efficient management of the ecosystems ensuring the speed restoration of the QTP under severe grazing and extreme climatic circumstances.

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The mammary gland is a remarkably dynamic organ of milk synthesis and secretion, and it experiences drastic structural and metabolic changes during the transition from dry periods to lactation, which involves the expression and regulation of numerous genes and regulatory factors. Long non-coding RNA (lncRNA) has considered as a novel type of regulatory factors involved in a variety of biological processes. However, their role in the lactation cycle of yak is still poorly understood. To reveal the involved mechanism, Ribo-zero RNA sequencing was employed to profile the lncRNA transcriptome in mammary tissue samples from yak at two physiological stages, namely lactation (LP) and dry period (DP). Notably, 1,599 lncRNA transcripts were identified through four rigorous steps and filtered through protein-coding ability. A total of 59 lncRNAs showed significantly different expression between two stages. Accordingly, the results of qRT-PCR were consistent with that of the transcriptome data. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses indicated that target genes of differentially expressed lncRNAs (DELs) were involved in pathways related to lactation, such as ECM-receptor interaction, PI3K-Akt signaling pathway, biosynthesis of amino acids and focal adhesion etc. Finally, we constructed a lncRNA-gene regulatory network containing some well known candidate genes for milk yield and quality traits. This is the first study to demonstrate a global profile of lncRNA expression in the mammary gland of yak. These results contribute to a valuable resource for future genetic and molecular studies on improving milk yield and quality, and help us to gain a better understanding of the molecular mechanisms underlying lactogenesis and mammary gland development of yak.

Background Grazing is widely regarded as a critical factor affecting the vegetation structure, productivity and nutritional value of natural grasslands. To protect and restore degraded grasslands, non-grazed exclosures are considered as a valuable tool. However, it is not clear whether long term non-grazed exclosures of grazers can improve the condition and nutritional value of vegetation and soil properties. Methods We have compared the impact of long-term non-grazed and continuous grazed management strategy on vegetation structure, nutritional values and soil properties of alpine meadow of the Qinghai-Tibet Plateau by field investigation (11–13 years) and indoor analysis during 2015–2017. Results Our results showed that long-term non-grazed exclosures clearly increased the aboveground biomass and coverage of plant functional types. Long-term non-grazed exclosures improved the development of all vegetation types, except NG (GG, grass species type; SG, sedge species type; LG, leguminous species type; FG, forbs species type and NG, noxious species type). Long-term non-grazed exclosures significantly improved all six measured soil properties (TN, total nitrogen; TP, total phosphorus; TK, total potassium; AN, available nitrogen; AP, available phosphorus and AK, available potassium) in 0–10 cm soil layer, considerable effect on the improvement of all measured soil properties, except TK in 10–20 cm soil layer and all measured soil properties, except TN and TK in 20–30 cm soil layer were observed. However, long-term non-grazed exclosures significantly decreased biodiversity indicators i.e., species richness, Shannon diversity index and Evenness index of vegetation. A substantial decrease in the density, biodiversity and nutritional values (CP (crude protein), IVTD (in vitro ture digestibility) and NDF (neutral detergent fiber)) of all vegetation types, except NG were recorded. While a downward trend in aboveground biomass and all measured soil properties except TP and TK were observed during 2015–2017 in alpine meadows due to long-term grazed treatment. The density, diversity and nutritional value (CP and IVTD) of long-term non-grazed alpine meadows showed a downward trend over time (2015–2017). By considering the biodiversity conservation and grassland livestock production, long-term non-grazed exclosures are not beneficial for the improvement of density, biodiversity and nutritional values of plant functional types. Thus, our study suggests that rotational non-grazed and grazed treatment would be a good management strategy to restore and improve the biodiversity and nutritional values of plant functional types in natural grassland ecosystems.

Long-term energy stress (ES) during the cold season is a serious problem for the breeding of yaks. In this paper, the response of fat metabolism in yaks to long-term ES during the cold season was studied. Gas chromatography (GC) analysis showed that the percentage of saturated fatty acids (SFAs) in the subcutaneous fat of the yaks in the ES group was 42.7%, which was less than the 56.6% in the CO group (p < 0.01) and the percentage of polyunsaturated unsaturated fatty acids (PUFAs) in the subcutaneous fat of the yaks in the ES group was 38.3%, which was more than the 26.0% in the CO group (p < 0.01). The serum analysis showed that fatty acid oxidation in yaks was increased under long-term ES. In the subcutaneous fat of yaks under long-term ES, the gene expression levels of glycerol-3-phosphate acyltransferase 4 (GPAT4), hormone-sensitive lipase (HSL), patatin-like phospholipase domain-containing protein 2 (PNPLA2), acyl-CoA dehydrogenase (ACAD), acyl-coenzyme A thioesterase 8 (ACOT8), facilitated glucose transporter (GLUT4), 3-oxoacyl-[acyl-carrier-protein] synthase (OXSM), oestradiol 17-beta-dehydrogenase 8 (HSD17B8) and malonate-Co-A ligase ACSF3 (ACSF3) were downregulated (q < 0.05), whereas the gene expression levels of aquaporin-7 (AQP7), long-chain-fatty-acid-CoA ligase (ACSL), elongation of very long chain fatty acids protein (ELOVL) and fatty acid desaturase 1 (FADS1) were upregulated (q < 0.05), indicating the inhibition of fat catabolism, fat anabolism, fatty acid oxidation, glucose (GLU) intake and SFA synthesis and the promotion of glycerinum (GLY) transportation and PUFA synthesis. Additional findings showed that the gene expression levels of leptin (LEP), adenosine 5′-monophosphate-activated protein kinase (AMPK) and phosphatidylinositol 3-kinase (PI3K) were upregulated (q < 0.05), whereas the gene expression levels of malonyl-CoA decarboxylase (MCD), sterol regulatory element-binding protein 1 (SREBF1), mammalian target of rapamycin (mTOR) and serine/threonine-protein kinase (AKT) were downregulated (q < 0.05), indicating that fat metabolism in the subcutaneous fat of yaks under ES was mainly regulated by AMPK signaling and mTOR and PI3K-AKT signaling were also involved. Energy consumption was inhibited in the subcutaneous fat itself. This study can provide a theoretical basis for the healthy breeding and genetic breeding of yaks.