We identify imidazole as a pH-activated linker for forming stable single molecule–gold junctions with several distinct configurations and reproducible electrical characteristics. Using a scanning tunneling microscope break junction (STMBJ) technique, we find multiple robust conductance signatures at integer multiples of 1.9 × 10–2 G 0 and 1.2 × 10–4 G 0 and determine that this molecule bridges the electrodes in its deprotonated form through the nitrogen atoms in basic conditions only, with several molecules able to bind in parallel and in series. The elongation these junctions can sustain is longer than the length of the molecule, suggesting that plastic deformation of gold electrodes occurs during stretching. Density functional theory calculations confirm that the imidazolate-linked junctions exhibit bond strengths of ∼2 eV, which can allow for plastic extraction of gold atoms. On the basis of these results, we hypothesize that lower conductance peaks correspond to chains of repeating molecule–gold units that we form and measure in situ.

Experimental techniques that determine atomic arrangements in single metal–molecule–metal junctions will enable a mechanistic understanding and control of electronic properties on the nanoscale. Here, we develop a method to determine average gold and silver nanogap widths with Angstrom resolution using single molecule junction conductance and distance measurements of N,N′-diamino alkanes in a scanning tunneling microscope break junction setup. Our experiments are supported by density functional theory (DFT) calculations, which suggest that the alkane-conducting trans-configurations can be outcompeted by the nonconducting cis conformers when the nanogap distance is shorter than the length of the molecule. As a result, the distribution of binding geometries during the conductance plateau is peaked when the gap width is comparable to the molecule length. We apply this conductance ruler to determine the binding geometry of N,N′-oligophenyl amines which have been observed to have two distinct conductance signatures. Our measurements and DFT calculations show that for the high conductance geometry, oligophenyls preferentially bind away from the apex of the electrodes, so that the tip–tip nanogap distance is less than the full length of the molecule and the π-system can overlap with the electrodes. Significantly, our new conductance ruler method allows us to determine that the low conductance of oligophenyls occurs when the interelectrode distance is greater than the N–N length of the molecule, requiring two π–π stacked molecules to bridge the junction.

We demonstrate single molecule conductance as a sensitive and atomically precise probe of binding configurations of adenine and its biologically relevant variants on gold. By combining experimental measurements and density functional theory (DFT) calculations of single molecule–metal junction structures in aqueous conditions, we determine for the first time that robust binding of adenine occurs in neutral or basic pH when the molecule is deprotonated at the imidazole moiety. The molecule binds through the donation of the electron lone pairs from the imidazole nitrogen atoms, N7 and N9, to the gold electrodes. In addition, the pyrimidine ring nitrogen, N3, can bind concurrently and strengthen the overall metal–molecule interaction. The amine does not participate in binding to gold in contrast to most other amine-terminated molecular wires due to the planar geometry of the nucleobase. DFT calculations reveal the importance of interface charge transfer in stabilizing the experimentally observed binding configurations. We demonstrate that biologically relevant variants of adenine, 6-methyladenine and 2′-deoxyadenosine, have distinct conductance signatures. These results lay the foundation for biosensing on gold using single molecule conductance readout.

The morphology, chemical composition, and electronic uniformity of thin‐film solution‐processed optoelectronics are believed to greatly affect device performance. Although scanning probe microscopies can address variations on the micrometer scale, the field of view is still limited to well under the typical device area, as well as the size of extrinsic defects introduced during fabrication. Herein, a micrometer‐resolution 2D characterization method with millimeter‐scale field of view is demonstrated, which simultaneously collects photoluminescence spectra, photocurrent transients, and photovoltage transients. This high‐resolution morphology mapping is used to quantify the distribution and strength of the local optoelectronic property variations in colloidal quantum dot solar cells due to film defects, physical damage, and contaminants across nearly the entire test device area, and the extent to which these variations account for overall performance losses. It is found that macroscopic defects have effects that are confined to their localized areas, rarely prove fatal for device performance, and are largely not responsible for device shunting. Moreover, quantitative analysis based on statistical partitioning methods of such data is used to show how defect identification can be automated while identifying variations in underlying properties such as mobilities and recombination strengths and the mechanisms by which they govern device behavior.

Understanding and manipulating quantum interference (QI) effects in single molecule junction conductance can enable the design of molecular-scale devices. Here we demonstrate QI between σ and π molecular orbitals in an ∼4 Å molecule, pyrazine, bridging source and drain electrodes. Using single molecule conductance measurements, first-principles analysis, and electronic transport calculations, we show that this phenomenon leads to distinct patterns of electron transport in nanoscale junctions, such as destructive interference through the para position of a six-membered ring. These QI effects can be tuned to allow conductance switching using environmental pH control. Our work lays out a conceptual framework for engineering QI features in short molecular systems through synthetic and external manipulation that tunes the energies and symmetries of the σ and π channels.