Mungbean (Vigna radiata) is a fast-growing, warm-season legume crop that is primarily cultivated in developing countries of Asia. Here we construct a draft genome sequence of mungbean to facilitate genome research into the subgenus Ceratotropis, which includes several important dietary legumes in Asia, and to enable a better understanding of the evolution of leguminous species. Based on the de novo assembly of additional wild mungbean species, the divergence of what was eventually domesticated and the sampled wild mungbean species appears to have predated domestication. Moreover, the de novo assembly of a tetraploid Vigna species (V. reflexo-pilosa var. glabra) provides genomic evidence of a recent allopolyploid event. The species tree is constructed using de novo RNA-seq assemblies of 22 accessions of 18 Vigna species and protein sets of Glycine max. The present assembly of V. radiata var. radiata will facilitate genome research and accelerate molecular breeding of the subgenus Ceratotropis.
A theoretical model for electron-impact ionization cross sections, which has been developed primarily for atoms and atomic ions, is applied to neutral molecules. The new model combines the binary-encounter theory and the Bethe theory for electron-impact ionization, and uses minimal theoretical data for the ground state of the target molecule, which are readily available from public-domain molecular structure codes such as GAMESS. The theory is called the binaryencounter Bethe (BEB) model, and does not, in principle, involve any adjustable parameters. Applications to 19 molecules, including H 2 , NO, CH 2 , C 6 H 6 , and SF 6 , are presented, demonstrating that the BEB model provides total ionization cross sections by electron impact from threshold to several keV with an average accuracy of 15% or better at the cross section peak, except for SiF 3 . The BEB model can be applied to stable molecules as well as to transient radicals. History:Received 13 A theoretical model for electron-impact ionization cross sections, which has been developed primarily for atoms and atomic ions, is applied to neutral molecules. The new model combines the binary-encounter theory and the Bethe theory for electron-impact ionization, and uses minimal theoretical data for the ground state of the target molecule, which are readily available from public-domain molecular structure codes such as GAMESS. The theory is called the binary-encounter Bethe ͑BEB͒ model, and does not, in principle, involve any adjustable parameters. Applications to 19 molecules, including H 2 , NO, CH 2 , C 6 H 6 , and SF 6 , are presented, demonstrating that the BEB model provides total ionization cross sections by electron impact from threshold to several keV with an average accuracy of 15% or better at the cross section peak, except for SiF 3 . The BEB model can be applied to stable molecules as well as to transient radicals.
A theoretical model for electron-impact total ionization cross sections, which has been found to be reliable for a wide range of molecules, is applied to molecules of interest to atmospheric science. The new theory, the binary-encounter-Bethe (BEB) model, combines the binaryencounter theory and the Bethe theory for electron-impact ionization, and uses simple theoretical data for the ground state of the target molecule, which are readily available from molecular structure codes. Total ionization cross sections of 11 molecules, CS, CS 2 , COS, CH 4 , H 2 S, NH 3 , NO 2 , N 2 O, O 3 , S 2 , and SO 2 , are presented for incident electron energies from threshold to 1 keV with an average accuracy of 15% or better at the cross section peak. We also found that the use of vertical ionization potentials (IPs) rather than adiabatic IPs for the lowest IPs significantly improves BEB cross sections between the threshold and cross section peak for molecules whose adiabatic and vertical IPs are different by ~1 eV or more (CH 4 and NH 3 ). The BEB cross sections are presented in a compact analytic form with a small number of constants, making the cross sections suitable for modeling applications. ©1997 American Institute of Physics. History:Received 20 August 1996; accepted 11 October 1996 A theoretical model for electron-impact total ionization cross sections, which has been found to be reliable for a wide range of molecules, is applied to molecules of interest to atmospheric science. The new theory, the binary-encounter-Bethe ͑BEB͒ model, combines the binary-encounter theory and the Bethe theory for electron-impact ionization, and uses simple theoretical data for the ground state of the target molecule, which are readily available from molecular structure codes. Total ionization cross sections of 11 molecules, CS, CS 2 , COS, CH 4 , H 2 S, NH 3 , NO 2 , N 2 O, O 3 , S 2 , and SO 2 , are presented for incident electron energies from threshold to 1 keV with an average accuracy of 15% or better at the cross section peak. We also found that the use of vertical ionization potentials ͑IPs͒ rather than adiabatic IPs for the lowest IPs significantly improves BEB cross sections between the threshold and cross section peak for molecules whose adiabatic and vertical IPs are different by ϳ1 eV or more ͑CH 4 and NH 3 ). The BEB cross sections are presented in a compact analytic form with a small number of constants, making the cross sections suitable for modeling applications.
Although strains of attenuated Salmonella typhimurium and wild-type Escherichia coli show similar tumor-targeting capacities, only S. typhimurium significantly suppresses tumor growth in mice. The aim of the present study was to examine bacteria-mediated immune responses by conducting comparative analyses of the cytokine profiles and immune cell populations within tumor tissues colonized by E. coli or attenuated Salmonellae. CT26 tumor-bearing mice were treated with two different bacterial strains: S. typhimurium defective in ppGpp synthesis (ΔppGpp Salmonellae) or wild-type E. coli MG1655. Cytokine profiles and immune cell populations in tumor tissue colonized by these two bacterial strains were examined at two time points based on the pattern of tumor growth after ΔppGpp Salmonellae treatment: 1) when tumor growth was suppressed ('suppression stage') and 2) when they began to re-grow ('re-growing stage'). The levels of IL-1β and TNF-α were markedly increased in tumors colonized by ΔppGpp Salmonellae. This increase was associated with tumor regression; the levels of both IL-1β and TNF-α returned to normal level when the tumors started to re-grow. To identify the immune cells primarily responsible for Salmonellae-mediated tumor suppression, we examined the major cell types that produce IL-1β and TNF-α. We found that macrophages and dendritic cells were the main producers of TNF-α and IL-1β. Inhibiting IL-1β production in Salmonellae-treated mice restored tumor growth, whereas tumor growth was suppressed for longer by local administration of recombinant IL-1β or TNF-α in conjunction with Salmonella therapy. These findings suggested that IL-1β and TNF-α play important roles in Salmonella-mediated cancer therapy. A better understanding of host immune responses in Salmonella therapy may increase the success of a given drug, particularly when various strategies are combined with bacteriotherapy.
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