A parasite's shift to a new host may have serious evolutionary consequences, since host switching usually is associated with a change in virulence and may lead to the evolution of emerging diseases. This phenomenon remains insufficiently studied in wildlife. Here, we combine microscopic examination of blood films and PCR-based methods to investigate the natural host specificity of Haemoproteus and Plasmodium spp. in birds of 4 families of the Passeriformes within a small geographic area. The material was collected on the Curonian Spit in the Baltic Sea between May and July in 2003-2004. A nested-PCR protocol was used for amplifying and sequencing a fragment of 480 nucleotides of the cytochrome b gene of the mtDNA of these parasites. Blood samples from 282 birds, which were positive both by microscopic examination of blood films and mtDNA amplification, were used in this study. We found that Haemoproteus majoris (lineages hPARUS1, hCCF5, hWW2, and hPHSIB1), Haemoproteus sp. (hWW1), Plasmodium (Haemamoeba) sp. (pSGS1), and Plasmodium (Haemamoeba) sp. (pGRW11) are capable of infecting birds belonging to different families of passeriform birds. Some species of Haemoproteus are less specific than have been traditionally believed. Haemoproteus majoris appears to have a genetic predisposition to have a broad host range. The level of host specificity varies markedly among different species of hemosporidian parasites of birds. The natural host range is thus not a reliable taxonomic character in the systematics of these parasites in the form in which it is still accepted in some recent taxonomic studies.
Most cetacean species are wide-ranging and highly mobile, creating significant challenges for researchers by limiting the scope of data that can be collected and leaving large areas un-surveyed. Aerial surveys have proven an effective way to locate and study cetacean movements but are costly and limited in spatial extent. Here we present a semi-automated pipeline for whale detection from very high-resolution (sub-meter) satellite imagery that makes use of a convolutional neural network (CNN). We trained ResNet, and DenseNet CNNs using down-scaled aerial imagery and tested each model on 31 cm-resolution imagery obtained from the WorldView-3 sensor. Satellite imagery was tiled and the trained algorithms were used to classify whether or not a tile was likely to contain a whale. Our best model correctly classified 100% of tiles with whales, and 94% of tiles containing only water. All model architectures performed well, with learning rate controlling performance more than architecture. While the resolution of commercially-available satellite imagery continues to make whale identification a challenging problem, our approach provides the means to efficiently eliminate areas without whales and, in doing so, greatly accelerates ocean surveys for large cetaceans.
SUMMARY
Migratory birds are able to use the sun and associated polarised light patterns, stellar cues and the geomagnetic field for orientation. No general agreement has been reached regarding the hierarchy of orientation cues. Recent data from naturally migrating North American Catharus thrushes suggests that they calibrate geomagnetic information daily from twilight cues. Similar results have been shown in caged birds in a few studies but not confirmed in others. We report that free-flying European migrants, song thrushes Turdus philomelos, released after pre-exposure to a horizontally rotated magnetic field, do not recalibrate their magnetic compass from solar cues, but rather show a simple domination of either the magnetic or the stellar compass. We suggest that different songbird species possess different hierarchies of orientation cues, depending on the geographic and ecological challenges met by the migrants.
Some of the factors that could influence changes in phenology of the song thrush (Turdus philomelos) during spring migration have been analyzed in relation to the timing of their return to the south-east Baltic region over the last 40 years. These include wind direction and velocity, temperature and precipitation in the wintering areas and along the migratory route. In March, a significant correlation was found between the timing of passage in the Baltic region and both the air temperatures in wintering area and winds over the migratory route. In April, when mass migration of thrushes occurs, the timing of passage was correlated with temperature, winds and, partly, precipitation over the route of migration. In this month, the frequency of tailwinds increased significantly along the route of migration from south-west France to the Baltic region over the last 40 years. The tailwind frequency was correlated with the beginning, middle and end of spring passage, accounting for 51% of the variance of median dates of the passage. The higher ambient temperatures over the migratory route explain nearly 20% of the variance in the timing of passage. Our results suggest that the advance in the timing of spring migration is primarily due to (1) the increased frequency of tailwinds favorable for migratory flights over the migratory route, and (2) the earlier emergence of the conditions enhancing migration due to higher spring temperatures in the winter quarters and on the migratory route.
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