This work examines the breakup of a single drop of various low viscosity fluids as it deforms in the presence of continuous horizontal air jet. Such a fragmentation typically occurs after the bulk liquid has disintegrated upon exiting the atomizer and is in the form of an ensemble of drops which undergo further breakup. The drop deformation and its eventual disintegration is important in evaluating the efficacy of a particular industrial process, be it combustion in automobile engines or pesticide spraying in agricultural applications. The interplay between competing influences of surface tension and aerodynamic disruptive forces is represented by the Weber number, We, and Ohnesorge number, Oh, and used to describe the breakup morphology. The breakup pattern considered in our study corresponds to that of a bag attached to a toroidal ring which occurs from ∼12 < We < ∼16. We aim to address several issues connected with this breakup process and their dependence on We and Oh which have been hitherto unexplored. The We boundary at which breakup begins is theoretically determined and the expression obtained, $We = 12( {1 + {\raise0.7ex\hbox{2} \!\mathord{\left/ {\vphantom {2 3}}\right.\kern-\nulldelimiterspace}\!\lower0.7ex\hbox{3}}Oh^2 } )$We=12(1+2/3Oh2), is found to match well with experimental data {[L.-P. Hsiang and G. M. Faeth, Int. J. Multiphase Flow 21(4), 545–560 (1995)] and [R. S. Brodkey, “Formation of drops and bubbles,” in The Phenomena of Fluid Motions (Addison-Wesley, Reading, 1967)]}. An exponential growth in the radial extent of the deformed drop and the streamline dimension of the bag is predicted by a theoretical model and confirmed by experimental findings. These quantities are observed to strongly depend on We. However, their dependence on Oh is weak.
The ability of a healthy immune system to clear the plethora of antigens it encounters incessantly relies on the enormous plasticity displayed by the comprising cell types. Macrophages (MΦs) are crucial member of the mononuclear phagocyte system (MPS) that constantly patrol the peripheral tissues and are actively recruited to the sites of injury and infection. In tissues, infiltrating monocytes replenish MΦ. Under the guidance of the local micro-milieu, MΦ can be activated to acquire specialized functional phenotypes. Similar to T cells, functional polarization of macrophage phenotype viz., inflammatory (M1) and reparative (M2) is proposed. Equipped with diverse toll-like receptors (TLRs), these cells of the innate arm of immunity recognize and phagocytize antigens and secrete cytokines that activate the adaptive arm of the immune system and perform key roles in wound repair. Dysregulation of MΦ plasticity has been associated with various diseases and infection. MicroRNAs (miRNAs) have emerged as critical regulators of transcriptome output. Their importance in maintaining health, and their contribution toward disease, encompasses virtually all aspects of human biology. Our understanding of miRNA-mediated regulation of MΦ plasticity and polarization can be utilized to modulate functional phenotypes to counter their role in the pathogenesis of numerous disease, including cancer, autoimmunity, periodontitis, etc. Here, we provide an overview of current knowledge regarding the role of miRNA in shaping MΦ polarization and plasticity through targeting of various pathways and genes. Identification of miRNA biomarkers of diagnostic/prognostic value and their therapeutic potential by delivery of miRNA mimics or inhibitors to dynamically alter gene expression profiles in vivo is highlighted.
Background:Human papilloma virus (HPV) accounts for the most common cause of all virus-associated human cancers. Here, we describe the first graphic user interface (GUI)-based automated tool ‘HPVDetector', for non-computational biologists, exclusively for detection and annotation of the HPV genome based on next-generation sequencing data sets.Methods:We developed a custom-made reference genome that comprises of human chromosomes along with annotated genome of 143 HPV types as pseudochromosomes. The tool runs on a dual mode as defined by the user: a ‘quick mode' to identify presence of HPV types and an ‘integration mode' to determine genomic location for the site of integration. The input data can be a paired-end whole-exome, whole-genome or whole-transcriptome data set. The HPVDetector is available in public domain for download: http://www.actrec.gov.in/pi-webpages/AmitDutt/HPVdetector/HPVDetector.html.Results:On the basis of our evaluation of 116 whole-exome, 23 whole-transcriptome and 2 whole-genome data, we were able to identify presence of HPV in 20 exomes and 4 transcriptomes of cervical and head and neck cancer tumour samples. Using the inbuilt annotation module of HPVDetector, we found predominant integration of viral gene E7, a known oncogene, at known 17q21, 3q27, 7q35, Xq28 and novel sites of integration in the human genome. Furthermore, co-infection with high-risk HPVs such as 16 and 31 were found to be mutually exclusive compared with low-risk HPV71.Conclusions:HPVDetector is a simple yet precise and robust tool for detecting HPV from tumour samples using variety of next-generation sequencing platforms including whole genome, whole exome and transcriptome. Two different modes (quick detection and integration mode) along with a GUI widen the usability of HPVDetector for biologists and clinicians with minimal computational knowledge.
Quantitative application of digital in-line holography (DIH) to characterize multiphase fragmentation is demonstrated. DIH is applied to record sequential holograms of the breakup of an ethanol droplet in an aerodynamic flow field. Various stages of the breakup process are recorded, including deformation, bag growth, bag breakup, and rim breakup. A recently proposed hybrid method is applied to extract the three-dimensional (3D) location and size of secondary droplets as well as the 3D morphology of the rim. Particle matching between sequential frames is used to determine the velocity. Coincidence with the results obtained from phase Doppler anemometry measurement demonstrates the accuracy of measurement by DIH and the hybrid method.
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