We have studied electrical conduction of conjugated molecules with phenyl rings embedded into alkanethiol self-assembled monolayers (SAMs), to investigate the molecular structural effect on the electrical conduction. Scanning tunneling microscope (STM) images of this surface revealed that the conjugated molecules with phenyl rings adsorbed mainly on defects and domain boundaries of the pre-assembled alkanethiol (nonanethiol C9) SAM and formed conjugated domains. In the case of conjugated molecules with one or three methylene groups between the sulfur and phenyl rings, the measured height of the conjugated molecular domains depended on their lateral sizes, while a strong dependence was not observed in the case of conjugated molecules without a methylene group. By analyzing size dependence on the height of the conjugated molecular domain, we could evaluate the electronic conductivity of the molecular domains. As a result of the analysis, to increase the vertical conduction of the molecular domains, one methylene group was found to be necessary between the sulfur and aromatic phenyl rings. Local barrier heights on the conjugated molecular domains in all the cases were larger than on the C9 SAM surface, suggesting that the increase in the vertical conductivitity is not likely to be due to the lowering of the local barrier height, but can be attributed to the conjugated molecular adsorption. X-ray photoelectron spectra (XPS) and ultraviolet light photoelectron spectra (UPS) revealed that the carrier density among conjugated molecular SAMs does not depend on the number of methylene groups between the sulfur and phenyl rings, suggesting that the higher vertical conduction of conjugated molecules with one methylene group can probably be attributed to higher transfer probability of carriers during the STM measurements.

Electric conductivity of organic molecules was estimated with molecular resolution using self-assembled techniques and scanning tunneling microscopy (STM). Conjugated molecules of [1,1‘:4‘,1‘ ‘-terphenyl]-4-methanethiol (TP) were embedded in self-assembled monolayers of insulative n-alkanethiols, and when observed by STM, TP molecules appeared as protruding domains. The apparent height of the TP domains increases as the lateral size of the domains grows from 1 to 10 nm, reflecting the increase in the vertical conductance of the domains due to the lateral, intermolecular interaction. We assumed that the molecules are connected to each other with resistors for estimating the effect of intermolecular interaction on the conductance and calculated the height of conducting disks with various radii, which should roughly reproduce the size-dependent height of the TP domains observed by STM. The estimated resistance of the single TP molecule was less than 40 GΩ, and the effective lateral conductivity corresponding to the large TP domains was larger than 0.01 S/cm.

The structures and dynamic formation processes of adlayers of 5,10,15,20-tetrakis(N-methylpyridinium-4-yl)-21H,23H-porphine (TMPyP) on both bare Au(111) and iodine-modified Au(111) in perchloric acid have been investigated in detail by using in situ scanning tunneling microscopy (STM). Highly-ordered TMPyP arrays formed on iodine-modified Au(111), whereas disordered adlayers were consistently found on bare Au(111) surface. High-resolution STM images revealed the characteristic internal shape and orientation of each TMPyP molecule in ordered adlayers. Time-dependent in situ STM allowed direct observation of the dynamics of the self-ordering processes. Before the most stable adlayer was established in a relatively small domain, several structural changes were found to occur, including the formation of a one-dimensional ordered chain at an early stage and several phase transitions in the ordered adlayers. Once the most stable adlayer was formed as a nucleus in a domain, two-dimensional growth of the domain extended over the entire area of the terraces with the final packing arrangement.

An organodisulfide with a pair of adamantane moieties was synthesized, and its self-assembled monolayer (SAM) was formed on Au(111). The adamantane moieties are almost spherical and much bulkier than alkyl chains. The structure was characterized by scanning tunneling microscopy. Two-dimensional crystals of the SAM were found to be four orientationally different hexagonals with almost the same lattice constant with 4 radical 3a/3 and 7a/3 (a = 0.2884 nm, the Au lattice constant). The structure is assigned to four of the high-order commensurate adlayers. The present study of geometry and energetics for self-assembling of such an organosulfur compound with spherical cages provides a new insight into the probable SAM structure of various thiolate derivatives on Au(111).

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We investigated the adsorption processes of terphenyl (TP) derivatized thiols, [1,1‘:4‘,1‘ ‘-terphenyl]-4-thiol (TP0), which form self-assembled monolayers (SAMs) on Au(111). Scanning tunneling microscopy observation revealed that the adsorption process is dependent on the solvent in which the TP0 molecules can dissolve. When methylene chloride was used as a solvent, the TP0 molecules nucleate anisotropically along 〈112〉 directions with a 3-fold symmetry at the initial stage. At 1 min of immersion, a phase-separated image was taken. In the topographically lower region, molecular lattices (a = 0.65 ± 0.05 nm, b = 1.3 ± 0.05 nm) appeared, where the TP0 molecules were arranged parallel to the Au surface. After more than 5 min of immersion, the molecular lattices disappeared and larger striped patterns with a spacing of ca. 8 nm were observed. On the other hand, when ethanol was used as a solvent, the adsorption process of the TP0 molecules completely changed, and such larger striped patterns were not observed after 1 day of immersion. Our data demonstrate that ethanol facilitated the formation of the more densely packed TP0 SAMs than methylene chloride solvent.

This article reviews recent progress in the development of nanomaterial-based electrochemical biosensors for cancer biomarkers. Because of their high electrical conductivity, high affinity to biomolecules, and high surface area-to-weight ratios, nanomaterials, including metal nanoparticles, carbon nanotubes, and graphene, have been used for fabricating electrochemical biosensors. Electrodes are often coated with nanomaterials to increase the effective surface area of the electrodes and immobilize a large number of biomolecules such as enzymes and antibodies. Alternatively, nanomaterials are used as signaling labels for increasing the output signals of cancer biomarker sensors, in which nanomaterials are conjugated with secondary antibodies and redox compounds. According to this strategy, a variety of biosensors have been developed for detecting cancer biomarkers. Recent studies show that using nanomaterials is highly advantageous in preparing high-performance biosensors for detecting lower levels of cancer biomarkers. This review focuses mainly on the protocols for using nanomaterials to construct cancer biomarker sensors and the performance characteristics of the sensors. Recent trends in the development of cancer biomarker sensors are discussed according to the nanomaterials used.

A series of disulfides containing bicyclo[2.2.2]octane moieties have been synthesised and their self-assembled monolayers (SAMs) on Au(111) have been characterized using scanning tunnelling microscopy (STM).