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Ectomycorrhizal (ECM) associates of the exotic plantation species Pinus radiata were investigated above and below ground over two years in the North Island of New Zealand. ECM species were identified using morphological and molecular (restriction fragment length polymorphism and DNA sequencing) analysis. Eighteen ECM species were observed fruiting above ground; 19 ECM species were identified below ground. In the above ground study, Wilcoxina mikolae, Rhizopogon pseudoroseolus and Inocybe sindonia were noted for the first time as ECM associates of P. radiata in New Zealand. Below ground, the species W. mikolae, R. pseudoroseolus, Rhizopogon luteorubescens, Pseudotomentella sp., Pseudotomentella tristis and Tomentella sp. were found as new associates of P. radiata in New Zealand. Additionally, six ECM types were found that could not be identified with molecular analysis. The putative ECM taxa Tricholoma pessundatum, Laccaria laccata and Hebeloma crustuliniforme were examined by molecular analysis, and species identifications were proposed to be changed to Tricholoma sp., L. laccata and Hebeloma sp. for specimens associated with P. radiata in New Zealand. The species identity of I. sindonia, previously unidentified to species level, was determined with direct sequencing.

Many current tree improvement programs are incorporating assisted gene flow strategies to match reforestation efforts with future climates. This is the case for the lodgepole pine (Pinus contorta var. latifolia), the most extensively planted tree in western Canada. Knowledge of the structure and origin of pathogen populations associated with this tree would help improve the breeding effort. Recent outbreaks of the Dothistroma needle blight (DNB) pathogen Dothistroma septosporum on lodgepole pine in British Columbia and its discovery in Alberta plantations raised questions about the diversity and population structure of this pathogen in western Canada. Using genotyping-by-sequencing (GBS) on 119 D. septosporum isolates from 16 natural pine populations and plantations from this area, we identified four genetic lineages, all distinct from the other DNB lineages from outside of North America. Modeling of the population history indicated that these lineages diverged between 31.4 and 7.2k years ago, coinciding with the last glacial maximum and the post-glacial recolonization of lodgepole pine in western North America. The lineage found in the Kispiox Valley from British Columbia, where an unprecedented DNB epidemic occurred in the 1990s, was close to demographic equilibrium and displayed a high level of haplotypic diversity. Two lineages found in Alberta and Prince George (British Columbia) showed departure from random mating and contemporary gene flow, likely resulting from pine breeding activities and material exchanges in these areas. The increased movement of planting material could have some major consequences by facilitating secondary contact between genetically isolated DNB lineages, possibly resulting in new epidemics.

More than 1180 non-native species, mostly of Palaearctic origin, have been recorded from the boreal zone of Canada, with the highest diversity on the island of Newfoundland and in the southern boreal zone of Ontario and Quebec. The non-native biota of the boreal zone (and of Canada in general) is poorly known in terms of species composition and distribution. A large proportion of species are associated with disturbed anthropogenic habitats such as urban areas, agricultural landscapes, transportation and communication corridors, and industrial developments. Natural habitats in the boreal zone have a high degree of resistance to invasion compared with those of other Canadian zones, likely owing to harsh climates, low light levels, poor soil nutrient availability, low soil pH, low productivity, and dense covering of the ground by plants, especially bryophytes. Of the relatively few non-native species that have successfully colonized the boreal zone, many decline greatly in abundance after a few years, suggesting biotic resilience. To date the boreal zone has shown the least resistance and resilience to large vertebrates (moose and white-tailed deer) translocated to islands, diseases of vertebrates, and earthworms. In general, the ecological impacts of non-native species on the boreal zone have been poorly studied, and there are few examples where such impacts are evident. Likewise, there has been little attempt to quantify the economic impacts of non-native species in either the boreal zone or in Canada as a whole. In the few cases where management measures have been implemented for highly destructive non-native species, results have been somewhat successful, especially where classical biological control measures have been implemented against insects on trees. Chemical and mechanical management measures have had only limited success in localized situations. Management resources are most effectively applied to reducing the risk of introduction. The risk to the boreal zone posed by future new non-native species is increasing with the warming climate and the fast and direct transport of goods into the boreal zone from points of origin. Five recommendations are provided to address recognized gaps concerning non-native species.Résumé : On a enregistré plus de 1180 espèces non indigènes, surtout d'origine paléarctique, dans la zone de la forêt boréale du Canada, dont la plus grande diversité se retrouve sur l'île de Terre-Neuve et dans la zone boréale méridionale de l'Ontario et du Québec. Le biote non indigène de la zone boréale (et du Canada en général) est mal connu en ce qui concerne sa composition et sa distribution. Une forte proportion des espèces est associée à des habitats perturbés par l'homme comme les milieux urbains, les paysages agricoles, les corridors de communication et de transport ainsi que les développements industriels. Les habitats naturels de la zone boréale montrent un fort degré de résistance à l'invasion, comparativement à ceux d'autres zones du Canada, vraisemblablement à cause des climats rigou...

Variation in the ribosomal (rDNA) repeat was analyzed for 107 isolates of the pathogenic fungus Chondrostereum purpureum, collected from Europe, New Zealand, and North America. The rDNA repeat of a representative Canadian isolate of C. purpureum was cloned into the λ vector EMBL-3, and a detailed restriction map was constructed. Variation in the large non-transcribed spacer region of the rDNA was determined for the entire collection of isolates following amplification by the polymerase chain reaction (PCR) and analysis of restriction fragment length polymorphisms (RFLPs). Three distinct nuclear type patterns were identified using the restriction endonuclease HaeIII. Nuclear type I was found in North American, European, and New Zealand isolates. Nuclear type II was only detected in isolates collected from North America, and nuclear type III was observed in isolates collected from both Europe and New Zealand. Nuclear type I was the predominant nuclear type in eastern North America as indicated by a frequency of 0.78, and nuclear type II occurred with a frequency of 0.89 in western North America. Gene flow across the continent was indicated by nearly equal nuclear type distributions (nuclear type I, 0.41; nuclear type II, 0.59) in central North America, but geographic separation has led to unequal nuclear-type distributions across North America. Keywords: Chondrostereum purpureum, biological control, genetic variation, ribosomal DNA.

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Pitch canker is a highly damaging disease of Pinus radiata and the New Zealand forest industry is concerned by the potential impact of the disease, should it arrive, in New Zealand. To provide a rapid identification technique for this pathogen, a polymerase chain reaction-based diagnostic method has been developed. The method is able to detect the presence of the pathogen within infected host tissue, as well as infested soil and the reliability of the test has been estimated using Bayesian statistics.

Background: Three named species of Armillaria are currently recognised as occurring in New Zealand: Armillaria novae-zelandiae (G. Stev.) Herink, A. limonea (G. Stev.) Boesew. and Armillaria hinnulea Kile & Watling. A fourth species (Armillaria sp. nov.) has been collected in New Zealand over a period of 30 years but has not yet been named. Methods: Maximum likelihood analysis, using DNA sequence data from the internal transcribed spacer region (ITS) of the ribosomal DNA repeat, DNA sequencing of the elongation factor 1-α gene, cultural pairing studies and morphological examination were undertaken to confirm the novelty of Armillaria sp. nov. as a distinct species. Results: Armillaria sp. nov. is distinguished by the morphology of the fresh basidiocarp, cultural interfertility tests with other Armillaria species and DNA sequence data. Conclusions: Armillaria sp. nov. is here formally named Armillaria aotearoa.