Machine learning models for exploring structure-property relation for hydroxyapatite nanoparticles (HANPs) are still lacking. A multiscale multisource dataset is presented, including both experimental data (TEM/SEM, XRD/crystallinity, ROS, anti-tumor effects, and zeta potential) and computation results (containing 41,976 data samples with up to 9768 atoms) of nanoparticles with different sizes and morphologies at density functional theory (DFT), semi-empirical DFTB, and force field, respectively. Three geometric descriptors are set for the explainable machine learning methods to predict surface energies and surface stress of HANPs with satisfactory performance. To avoid the pre-determination of features, we also developed a predictive deep learning model within the framework of graph convolution neural network with good generalizability. Energies with DFT accuracy are achievable for large-sized nanoparticles from the learned correlations and scale functions for mapping different theoretical levels and particle sizes. The simulated XRD spectra and crystallinity values are in good agreement with experiments.
Conventional data augmentation realized by performing simple pre-processing operations (e.g., rotation, crop, etc.) has been validated for its advantage in enhancing the performance for medical image segmentation. However, the data generated by these conventional augmentation methods are random and sometimes harmful to the subsequent segmentation. In this paper, we developed a novel automatic learning-based data augmentation method for medical image segmentation which models the augmentation task as a trial-and-error procedure using deep reinforcement learning (DRL). In our method, we innovatively combine the data augmentation module and the subsequent segmentation module in an end-to-end training manner with a consistent loss. Specifically, the best sequential combination of different basic operations is automatically learned by directly maximizing the performance improvement (i.e., Dice ratio) on the available validation set. We extensively evaluated our method on CT kidney tumor segmentation which validated the promising results of our method.
Few-shot learning, especially few-shot image classification, has received increasing attention and witnessed significant advances in recent years. Some recent studies implicitly show that many generic techniques or "tricks", such as data augmentation, pre-training, knowledge distillation, and self-supervision, may greatly boost the performance of a few-shot learning method. Moreover, different works may employ different software platforms, different training schedules, different backbone architectures and even different input image sizes, making fair comparisons difficult and practitioners struggle with reproducibility. To address these situations, we propose a comprehensive library for few-shot learning (LibFewShot) by re-implementing seventeen state-of-the-art few-shot learning methods in a unified framework with the same single codebase in PyTorch. Furthermore, based on LibFewShot, we provide comprehensive evaluations on multiple benchmark datasets with multiple backbone architectures to evaluate common pitfalls and effects of different training tricks. In addition, given the recent doubts on the necessity of meta-or episodic-training mechanism, our evaluation results show that such kind of mechanism is still necessary especially when combined with pre-training. We hope our work can not only lower the barriers for beginners to work on few-shot learning but also remove the effects of the nontrivial tricks to facilitate intrinsic research on few-shot learning. The source code is available from https://github.com/RL-VIG/LibFewShot.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
hi@scite.ai
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.