3D point cloud analysis of imagery collected by unmanned aerial vehicles (UAV) has been shown to be a valuable tool for estimation of crop phenotypic traits, such as plant height, in several species. Spatial information about these phenotypic traits can be used to derive information about other important crop characteristics, like fresh biomass yield, which could not be derived directly from the point clouds. Previous approaches have often only considered single date measurements using a single point cloud derived metric for the respective trait. Furthermore, most of the studies focused on plant species with a homogenous canopy surface. The aim of this study was to assess the applicability of UAV imagery for capturing crop height information of three vegetables (crops eggplant, tomato, and cabbage) with a complex vegetation canopy surface during a complete crop growth cycle to infer biomass. Additionally, the effect of crop development stage on the relationship between estimated crop height and field measured crop height was examined. Our study was conducted in an experimental layout at the University of Agricultural Science in Bengaluru, India. For all the crops, the crop height and the biomass was measured at five dates during one crop growth cycle between February and May 2017 (average crop height was 42.5, 35.5, and 16.0 cm for eggplant, tomato, and cabbage). Using a structure from motion approach, a 3D point cloud was created for each crop and sampling date. In total, 14 crop height metrics were extracted from the point clouds. Machine learning methods were used to create prediction models for vegetable crop height. The study demonstrates that the monitoring of crop height using an UAV during an entire growing period results in detailed and precise estimates of crop height and biomass for all three crops (R 2 ranging from 0.87 to 0.97, bias ranging from −0.66 to 0.45 cm). The effect of crop development stage on the predicted crop height was found to be substantial (e.g., median deviation increased from 1% to 20% for eggplant) influencing the strength and consistency of the relationship between point cloud metrics and crop height estimates and, thus, should be further investigated. Altogether the results of the study demonstrate that point cloud generated from UAV-based RGB imagery can be used to effectively measure vegetable crop biomass in larger areas (relative error = 17.6%, 19.7%, and 15.2% for eggplant, tomato, and cabbage, respectively) with a similar accuracy as biomass prediction models based on measured crop height (relative error = 21.6, 18.8, and 15.2 for eggplant, tomato, and cabbage).
An accurate estimation of biomass is needed to understand the spatio-temporal changes of forage resources in pasture ecosystems and to support grazing management decisions. A timely evaluation of biomass is challenging, as it requires efficient means such as technical sensing methods to assess numerous data and create continuous maps. In order to calibrate ultrasonic and spectral sensors, a field experiment with heterogeneous pastures continuously stocked by cows at three grazing intensities was conducted. Sensor data fusion by combining ultrasonic sward height (USH) with narrow band normalized difference spectral index (NDSI) (R 2 CV = 0.52) or simulated WorldView2 (WV2) (R 2 CV = 0.48) satellite broad bands increased the prediction accuracy significantly, compared to the exclusive use of USH or spectral measurements. Some combinations were even better than the use of the full hyperspectral information (R 2 CV = 0.48). Spectral regions related to plant water content were found to be of particular importance (996-1225 nm). Fusion of ultrasonic and spectral sensors is a promising approach to assess biomass even in heterogeneous pastures. However, the suggested technique may have limited usefulness in the second half of the growing season, due to an increasing abundance of senesced material.
The NDVI is a remotely sensed vegetation index that is frequently used in ecological studies. There is, however, a lack of studies that evaluate the ability of the NDVI to detect fine‐scale variation in grassland plant community composition and species richness. Ellenberg indicators characterize the environmental preferences of plant species—and community‐mean Ellenberg values have been used to explore the environmental drivers of community assembly. We used variation partitioning to test the ability of satellite‐based NDVI to explain community‐mean Ellenberg nutrient (mN) and moisture (mF) indices, and the richness of habitat‐specialist species in dry grasslands of different ages. The grasslands represent a gradient of decreasing soil nutrient status. If community composition is determined by the responses of individual species to the underlying environmental conditions and if, at the same time, community composition determines the optical characteristics of the vegetation canopy, then positive relationships between the NDVI and mN and mF are expected. Many grassland specialists are intolerant of nutrient‐rich soils. If specialist richness is negatively related to soil‐nutrient levels, then a negative association between the NDVI and specialist richness is expected. However, because grassland community composition is not only influenced by abiotic variables but also by other spatial and temporal drivers, we included spatial variables and grassland age in the statistical analyses. The NDVI explained the majority of the variation in mF, and also contributed to a substantial proportion of the variation in mN. However, variation in specialist richness and the lowest values of mN were explained by grassland age and spatial variables—but were poorly explained by the NDVI. Synthesis and applications. The NDVI showed a good ability to detect variation in plant community composition, and should provide a valuable tool for assessing fine‐scale environmental variation in grasslands or for monitoring changes in grassland habitat properties. However, because the concentration of grassland specialists not only depends on environmental variables but also on the age and spatial context of the grasslands, the NDVI is unlikely to allow the identification of grasslands with high numbers of specialist species.
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