This paper presents an automated multi-organ segmentation method for 3D abdominal CT images based on a spatially-divided probabilistic atlases. Most previous abdominal organ segmentation methods are ineffective to deal with the large differences among patients in organ shape and position in local areas. In this paper, we propose an automated multi-organ segmentation method based on a spatiallydivided probabilistic atlas, and solve this problem by introducing a scale hierarchical probabilistic atlas. The algorithm consists of image-space division and a multi-scale weighting scheme. The generated spatial-divided probabilistic atlas efficiently reduces the inter-subject variance in organ shape and position either in global or local regions. Our proposed method was evaluated using 100 abdominal CT volumes with manually traced ground truth data. Experimental results showed that it can segment the liver, spleen, pancreas, and kidneys with Dice similarity indices of 95.1%, 91.4%, 69.1%, and 90.1%, respectively.
Abstract-This paper proposes a quick method of similaritybased signal searching to detect and locate a specific audio or video signal given as a query in a stored long audio or video signal. With existing techniques, similarity-based searching may become impractical in terms of computing time in the case of searching through long-running (several-days' worth of) signals. The proposed algorithm, which is referred to as time-series active search, offers significantly faster search with sufficient accuracy. The key to the acceleration is an effective pruning algorithm introduced in the histogram matching stage. Through the pruning, the actual number of matching calculations can be reduced by 200 to 500 times compared with exhaustive search while guaranteeing exactly the same search result. Experiments show that the proposed method can correctly detect and locate a 15-s signal in a 48-h recording of TV broadcasts within 1 s, once the feature vectors are calculated and quantized. As extentions of the basic algorithm, efficient AND/OR search methods for searching for multiple query signals and a feature dithering method for coping with signal distortion are also discussed.
Abstract. This paper presents a method for extracting lymph node regions from 3-D abdominal CT images using 3-D minimum directional difference filter. In the case of surgery of colonic cancer, resection of metastasis lesions is performed with resection of a primary lesion. Lymph nodes are main route of metastasis and are quite important for deciding resection area. Diagnosis of enlarged lymph nodes is quite important process for surgical planning. However, manual detection of enlarged lymph nodes on CT images is quite burden task. Thus, development of lymph node detection process is very helpful for assisting such surgical planning task. Although there are several report that present lymph node detection, these methods detect lymph nodes primary from PET images or detect in 2-D image processing way. There is no method that detects lymph nodes directly from 3-D images. The purpose of this paper is to show an automated method for detecting lymph nodes from 3-D abdominal CT images. This method employs a 3-D minimum directional difference filter for enhancing blob structures with suppressing line structures. After that, false positive regions caused by residua and vein are eliminated using several kinds of information such as size, blood vessels, air in the colon. We applied the proposed method to three cases of 3-D abdominal CT images. The experimental results showed that the proposed method could detect 57.0 % of enlarged lymph nodes with 58 FPs per case.
Computed tomography (CT) of the chest is a very common staging investigation for the assessment of mediastinal, hilar, and intrapulmonary lymph nodes in the context of lung cancer. In the current clinical workflow, the detection and assessment of lymph nodes is usually performed manually, which can be error-prone and timeconsuming. We therefore propose a method for the automatic detection of mediastinal, hilar, and intrapulmonary lymph node candidates in contrast-enhanced chest CT. Based on the segmentation of important mediastinal anatomy (bronchial tree, aortic arch) and making use of anatomical knowledge, we utilize Hessian eigenvalues to detect lymph node candidates. As lymph nodes can be characterized as blob-like structures of varying size and shape within a specific intensity interval, we can utilize these characteristics to reduce the number of false positive candidates significantly. We applied our method to 5 cases suspected to have lung cancer. The processing time of our algorithm did not exceed 6 minutes, and we achieved an average sensitivity of 82.1% and an average precision of 13.3%.
In this paper, we propose a hybrid method for tracking a bronchoscope that uses a combination of magnetic sensor tracking and image registration. The position of a magnetic sensor placed in the working channel of the bronchoscope is provided by a magnetic tracking system. Because of respiratory motion, the magnetic sensor provides only the approximate position and orientation of the bronchoscope in the coordinate system of a CT image acquired before the examination. The sensor position and orientation is used as the starting point for an intensity-based registration between real bronchoscopic video images and virtual bronchoscopic images generated from the CT image. The output transformation of the image registration process is the position and orientation of the bronchoscope in the CT image. We tested the proposed method using a bronchial phantom model. Virtual breathing motion was generated to simulate respiratory motion. The proposed hybrid method successfully tracked the bronchoscope at a rate of approximately 1 Hz.
This paper proposes a fully automated atlas-based pancreas segmentation method from CT volumes utilizing atlas localization by regression forest and atlas generation using blood vessel information. Previous probabilistic atlas-based pancreas segmentation methods cannot deal with spatial variations that are commonly found in the pancreas well. Also, shape variations are not represented by an averaged atlas. We propose a fully automated pancreas segmentation method that deals with two types of variations mentioned above. The position and size of the pancreas is estimated using a regression forest technique. After localization, a patient-specific probabilistic atlas is generated based on a new image similarity that reflects the blood vessel position and direction information around the pancreas. We segment it using the EM algorithm with the atlas as prior followed by the graph-cut. In evaluation results using 147 CT volumes, the Jaccard index and the Dice overlap of the proposed method were 62.1% and 75.1%, respectively. Although we automated all of the segmentation processes, segmentation results were superior to the other state-of-the-art methods in the Dice overlap.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
hi@scite.ai
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.