A situation where training and test samples follow different input distributions is called covariate shift. Under covariate shift, standard learning methods such as maximum likelihood estimation are no longer consistent-weighted variants according to the ratio of test and training input densities are consistent. Therefore, accurately estimating the density ratio, called the importance, is one of the key issues in covariate shift adaptation. A naive approach to this task is to first estimate training and test input densities separately and then estimate the importance by taking the ratio of the estimated densities. However, this naive approach tends to perform poorly since density estimation is a hard task particularly in high dimensional cases. In this paper, we propose a direct importance estimation method that does not involve density estimation. Our method is equipped with a natural cross validation procedure and hence tuning parameters such as the kernel width can be objectively optimized. Furthermore, we give rigorous mathematical proofs for the convergence of the proposed algorithm. Simulations illustrate the usefulness of our approach

Machine learning is an interdisciplinary field of science and engineering that studies mathematical theories and practical applications of systems that learn. This book introduces theories, methods, and applications of density ratio estimation, which is a newly emerging paradigm in the machine learning community. Various machine learning problems such as non-stationarity adaptation, outlier detection, dimensionality reduction, independent component analysis, clustering, classification, and conditional density estimation can be systematically solved via the estimation of probability density ratios. The authors offer a comprehensive introduction of various density ratio estimators including methods via density estimation, moment matching, probabilistic classification, density fitting, and density ratio fitting as well as describing how these can be applied to machine learning. The book also provides mathematical theories for density ratio estimation including parametric and non-parametric convergence analysis and numerical stability analysis to complete the first and definitive treatment of the entire framework of density ratio estimation in machine learning.

Divergence estimators based on direct approximation of density-ratios without going through separate approximation of numerator and denominator densities have been successfully applied to machine learning tasks that involve distribution comparison such as outlier detection, transfer learning, and two-sample homogeneity test. However, since density-ratio functions often possess high fluctuation, divergence estimation is still a challenging task in practice. In this paper, we propose to use relative divergences for distribution comparison, which involves approximation of relative density-ratios. Since relative density-ratios are always smoother than corresponding ordinary density-ratios, our proposed method is favorable in terms of the non-parametric convergence speed. Furthermore, we show that the proposed divergence estimator has asymptotic variance independent of the model complexity under a parametric setup, implying that the proposed estimator hardly overfits even with complex models. Through experiments, we demonstrate the usefulness of the proposed approach.

Background: Although microarray gene expression analysis has become popular, it remains difficult to interpret the biological changes caused by stimuli or variation of conditions. Clustering of genes and associating each group with biological functions are often used methods. However, such methods only detect partial changes within cell processes. Herein, we propose a method for discovering global changes within a cell by associating observed conditions of gene expression with gene functions.

Estimation of the ratio of probability densities has attracted a great deal of attention since it can be used for addressing various statistical paradigms. A naive approach to density-ratio approximation is to first estimate numerator and denominator densities separately and then take their ratio. However, this two-step approach does not perform well in practice, and methods for directly estimating density ratios without density estimation have been explored. In this paper, we first give a comprehensive review of existing density-ratio estimation methods and discuss their pros and cons. Then we propose a new framework of density-ratio estimation in which a density-ratio model is fitted to the true density-ratio under the Bregman divergence. Our new framework includes existing approaches as special cases, and is substantially more general. Finally, we develop a robust density-ratio estimation method under the power divergence, which is a novel instance in our framework.

The goal of sufficient dimension reduction in supervised learning is to find the lowdimensional subspace of input features that is 'sufficient' for predicting output values. In this paper, we propose a novel sufficient dimension reduction method using a squaredloss variant of mutual information as a dependency measure. We utilize an analytic approximator of squared-loss mutual information based on density ratio estimation, which is shown to possess suitable convergence properties. We then develop a natural gradient algorithm for sufficient subspace search. Numerical experiments show that the proposed method compares favorably with existing dimension reduction approaches.

The ratio of two probability densities can be used for solving various machine learning tasks such as covariate shift adaptation (importance sampling), outlier detection (likelihood-ratio test), feature selection (mutual information), and conditional probability estimation. Several methods of directly estimating the density ratio have recently been developed, e.g., moment matching estimation, maximum-likelihood density-ratio estimation, and least-squares density-ratio fitting. In this paper, we propose a kernelized variant of the least-squares method for density-ratio estimation, which is called kernel unconstrained leastsquares importance fitting (KuLSIF). We investigate its fundamental statistical properties including a non-parametric convergence rate, an analytic-form solution, and a leave-oneout cross-validation score. We further study its relation to other kernel-based density-ratio estimators. In experiments, we numerically compare various kernel-based density-ratio estimation methods, and show that KuLSIF compares favorably with other approaches.

We address the problem of estimating the difference between two probability densities. A naive approach is a two-step procedure of first estimating two densities separately and then computing their difference. However, this procedure does not necessarily work well because the first step is performed without regard to the second step, and thus a small estimation error incurred in the first stage can cause a big error in the second stage. In this letter, we propose a single-shot procedure for directly estimating the density difference without separately estimating two densities. We derive a nonparametric finite-sample error bound for the proposed single-shot density-difference estimator and show that it achieves the optimal convergence rate. We then show how the proposed density-difference estimator can be used in L²-distance approximation. Finally, we experimentally demonstrate the usefulness of the proposed method in robust distribution comparison such as class-prior estimation and change-point detection.