Plant traits-the morphological, anatomical, physiological, biochemical and phenological characteristics of plants-determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits-almost complete coverage for 'plant growth form'. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait-environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects.We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives. Geosphere-Biosphere Program (IGBP) and DIVERSITAS, the TRY database (TRY-not an acronym, rather a statement of sentiment; https ://www.try-db.org; Kattge et al., 2011) was proposed with the explicit assignment to improve the availability and accessibility of plant trait data for ecology and earth system sciences. The Max Planck Institute for Biogeochemistry (MPI-BGC) offered to host the database and the different groups joined forces for this community-driven program. Two factors were key to the success of TRY: the support and trust of leaders in the field of functional plant ecology submitting large databases and the long-term funding by the Max Planck Society, the MPI-BGC and the German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, which has enabled the continuous development of the TRY database.
The theory of metabolic ecology predicts specific relationships among tree stem diameter, biomass, height, growth and mortality. As demographic rates are important to estimates of carbon fluxes in forests, this theory might offer important insights into the global carbon budget, and deserves careful assessment. We assembled data from 10 oldgrowth tropical forests encompassing censuses of 367 ha and > 1.7 million trees to test the theory's predictions. We also developed a set of alternative predictions that retained some assumptions of metabolic ecology while also considering how availability of a key limiting resource, light, changes with tree size. Our results show that there are no universal scaling relationships of growth or mortality with size among trees in tropical forests. Observed patterns were consistent with our alternative model in the one site where we had the data necessary to evaluate it, and were inconsistent with the predictions of metabolic ecology in all forests.
Summary The relationship between species richness and ecosystem function, as measured by productivity or biomass, is of long‐standing theoretical and practical interest in ecology. This is especially true for forests, which represent a majority of global biomass, productivity and biodiversity. Here, we conduct an analysis of relationships between tree species richness, biomass and productivity in 25 forest plots of area 8–50 ha from across the world. The data were collected using standardized protocols, obviating the need to correct for methodological differences that plague many studies on this topic. We found that at very small spatial grains (0.04 ha) species richness was generally positively related to productivity and biomass within plots, with a doubling of species richness corresponding to an average 48% increase in productivity and 53% increase in biomass. At larger spatial grains (0.25 ha, 1 ha), results were mixed, with negative relationships becoming more common. The results were qualitatively similar but much weaker when we controlled for stem density: at the 0.04 ha spatial grain, a doubling of species richness corresponded to a 5% increase in productivity and 7% increase in biomass. Productivity and biomass were themselves almost always positively related at all spatial grains. Synthesis. This is the first cross‐site study of the effect of tree species richness on forest biomass and productivity that systematically varies spatial grain within a controlled methodology. The scale‐dependent results are consistent with theoretical models in which sampling effects and niche complementarity dominate at small scales, while environmental gradients drive patterns at large scales. Our study shows that the relationship of tree species richness with biomass and productivity changes qualitatively when moving from scales typical of forest surveys (0.04 ha) to slightly larger scales (0.25 and 1 ha). This needs to be recognized in forest conservation policy and management.
Forest floor CO(2) efflux (FF(cer)) is an important component of global carbon budgets, but the spatial variability of forest floor respiration within a forest type is not well documented. Measurements of FF(cer) were initiated in mid-March of 1991 and continued at biweekly to monthly intervals until mid-November. Observations were made at 45 sites along topographic gradients of the Walker Branch Watershed, Tennessee including northeast and southwest facing slopes, valley-bottoms, and exposed ridge-top locations. The FF(cer) measurements were made with a portable gas-exchange system, and all observations were accompanied by soil temperature and soil water content measurements. As expected, FF(cer) exhibited a distinct seasonal trend following patterns of soil temperature, but soil water content and the volume percent of the soil's coarse fraction were also correlated with observed rates. Over the entire measurement period, FF(cer) ranged from a typical minimum of 0.8 micro mol m(-2) s(-1) to an average maximum near 5.7 micro mol m(-2) s(-1). No significant differences in FF(cer) were observed among the ridge-top and slope positions, but FF(cer) in the valley-bottom locations was lower on several occasions. An empirical model of FF(cer) based on these observations is suggested for application to whole-stand estimates of forest carbon sequestration.
Abstract:This study provides a community-level analysis of how regeneration requirement and adult stature are related to tree allometry (diameter, height and crown size) throughout post-seedling ontogeny on Barro Colorado Island, Panama. Comparing 65 species, gap species are taller, have higher diameter growth rates and occupy more low-canopy sites (≤ 10 m canopy height) than shade species at small diameters (≤ 10 cm dbh). For trees > 10 cm dbh, diameter-height relationships and growth rates no longer differ between gap and shade species, but shade species have larger, particularly deeper, crowns than gap species. Species with tall adult stature have more slender stems with larger crowns compared with treelet and mid-canopy species starting at 5 cm dbh. From 10 to 40 cm dbh, diameter growth rate is also significantly greater for tall species. The consistent allometric differences between functional groups on a community level will, in part, determine vertical and horizontal stand structure.
Remote sensing can transform the speed, scale, and cost of biodiversity and forestry surveys. Data acquisition currently outpaces the ability to identify individual organisms in high resolution imagery. We outline an approach for identifying tree-crowns in RGB imagery while using a semi-supervised deep learning detection network. Individual crown delineation has been a long-standing challenge in remote sensing and available algorithms produce mixed results. We show that deep learning models can leverage existing Light Detection and Ranging (LIDAR)-based unsupervised delineation to generate trees that are used for training an initial RGB crown detection model. Despite limitations in the original unsupervised detection approach, this noisy training data may contain information from which the neural network can learn initial tree features. We then refine the initial model using a small number of higher-quality hand-annotated RGB images. We validate our proposed approach while using an open-canopy site in the National Ecological Observation Network. Our results show that a model using 434,551 self-generated trees with the addition of 2848 hand-annotated trees yields accurate predictions in natural landscapes. Using an intersection-over-union threshold of 0.5, the full model had an average tree crown recall of 0.69, with a precision of 0.61 for the visually-annotated data. The model had an average tree detection rate of 0.82 for the field collected stems. The addition of a small number of hand-annotated trees improved the performance over the initial self-supervised model. This semi-supervised deep learning approach demonstrates that remote sensing can overcome a lack of labeled training data by generating noisy data for initial training using unsupervised methods and retraining the resulting models with high quality labeled data.
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Size distributions of tropical trees The distribution of tree size in tropical forests follows a power-law regardless of location. This pattern has largely eluded mechanistic explanation. Using 30 years of tree demography and growth data from a forest plot in Panama, Farrior et al. show that the power-law size structure emerges after natural local disturbances such as the gaps formed by falling trees. A model of forest dynamics identifies the structural parameter governing the power-law distribution. A mechanistic understanding of tropical forest structural dynamics will benefit forest carbon cycling studies. Science , this issue p. 155
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