Simple trichal types constitute a group of cyanobacteria with an abundance of novel, often cryptic taxa. Here, we investigated material collected from wet surface-soil in a saline environment in Petchaburi Province, central Thailand. A morphological comparison of the isolated strain with similar known species, as well as its phylogenetic and species delimitation analyses based on the combined datasets of other related organisms, especially simple trichal cyanobacteria, revealed that the material of this study represented an independent taxon. Using a multifaceted method, we propose that this material represents a new genus, Thainema gen. nov., belonging to the family Leptolyngbyaceae, with the type species Thainema salinarum sp. nov. This novel taxon shares similar ecological habitats with strains previously placed in the same lineage.
Information regarding the diversity of Cyanobacteria in many parts of the world is still minimal. One example of a region that has not yet been widely studied is south-western Asia, including the region of the Persian Gulf. A culture-dependent study of cyanobacterial diversity in a rainwater basin on Kharg Island enabled the isolation of a novel taxon, previously unnamed, from a simple trichal cyanobacterium. Further comparisons showed the existence of closely related strains/taxa from other parts of the world, namely the strains CCALA 945 isolated from South Italy and "Leptolyngbya india" from India. Herein, we have thus described the new genus Khargia and the new species Khargia iranica. Other strains, isolated by other authors, were included in the Khargia genus as additional species: Khargia italica and Khargia indica. The recognition of the new genus was based on morphological evaluations (identification by both light and electron microscopy), the phylogenetic analyses based on the 16S rRNA gene, and species delimitation based on Automatic Barcode Gap Definition (ABGD), Generalized Mixed Yule Coalescent (GMYC), bayesian version of Poisson Tree Processes (bPTP), and the secondary structure of 16S-23S rRNA ITS region of the studied strains.
In marine mammals, nematode-inflicted pathological lesions combined with other pathogens and factors (i.e., pollution, climate change, domoic acid poisoning events, and seasonal El Nino starvation events) negatively impact pinnipeds’ health and may cause mortality. Five California sea lions (Zalophus californianus)—a female pup, three male yearlings, and an adult female—suffered mortalities during rehabilitation at the Marine Mammal Care Center Los Angeles (San Pedro, CA). According to the necropsy reports, animals developed multisystemic parasitism as a leading cause of death, combined with malnutrition and hypoglycemia. In order to reveal host–parasite dynamics that may play a role in pinniped health and recovery, we examined the type and level of histopathological stomach lesions in California sea lions caused by anisakid nematodes. All isolated anisakids were morphologically and molecularly identified, and their phylogenetic relationships were reconstructed using the sequence of the mitochondrial COII gene. Co-parasitation of different Anisakidae spp. within the same host or lesions presented the opportunity to evaluate the existence of recombinant haplotypes and their eventual pathological pressure exerted onto host. The lesions were presented as chronic granulomatous gastritis, with moderate edema and hyperemia of the tunica submucosa and lamina propria, followed by mild, focal fibrosis of the gastric wall. Ulcerative changes with mixed leukocytic infiltrate showed to be localized, shallow, and non-perforative and with no apparent bacterial coinfection, mostly accompanied by healing granulation tissue. Isolated anisakids are grouped into three distinctively separated monophyletic clades corresponding to genera Anisakis, Contracaecum, and Pseudoterranova. Most abundant were representatives of Contracaecum ogmorhini sensu lato (55.36%), followed by Anisakis pegreffii (23.21%), Pseudoterranova azarasi (17.86%), Pseudoterranova decipiens sensu lato (1.79%), and Anisakis simplex (1.79%). Phylogenetic trees revealed no differentiation at intra-species level. Our analysis of divergence revealed Contracaecum separated from other lineages in the Jurassic period at the 176.2 Mya and Anisakis diverging from Pseudoterranova in Cenozoic period at 85.9 Mya.
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