We have used a combination of FTIR, VCD, ECD, Raman, and NMR spectroscopies to probe the solution conformations sampled by H-(AAKA)-OH by utilizing an excitonic coupling model and constraints imposed by the 3JCalphaHNH coupling constants of the central residues to simulate the amide I' profile of the IR, isotropic Raman, anisotropic Raman, and VCD spectra in terms of a mixture of three conformations, i.e., polyproline II, beta-strand and right-handed helical. The representative coordinates of the three conformations were obtained from published coil libraries. Alanine was found to exhibit PPII fractions of 0.60 or greater, mixed with smaller fractions of helices and beta-strand conformations. Lysine showed no clear conformational propensity in that it samples polyproline II, beta-strand, and helical conformations with comparable probability. This is at variance with results obtained earlier for ionized polylysine, which suggest a high polyproline II propensity. We reanalyzed previously investigated tetra- and trialanine by combining published vibrational spectroscopy data with 3JCalphaHNH coupling constants and obtained again blends dominated by PPII with smaller admixtures of beta-strand and right-handed helical conformations. The polyproline II propensity of alanine was found to be higher in tetraalanine than in trialanine. For all peptides investigated, our results rule out a substantial population of turn-like conformations. Our results are in excellent agreement with MD simulations on short alanine peptides by Gnanakaran and Garcia [(2003) J. Phys. Chem. B 107, 12555-12557] but at variance with multiple MD simulations particularly for the alanine dipeptide.

Combined computational and experimental techniques were employed to investigate at the microscopic level the structural and dynamic properties of ferro- and ferricyanide ions in aqueous solution. The characterization of the structural patterns and multiscale dynamics taking place within the first solvation spheres in water and heavy water solvents was first achieved through extensive molecular dynamics simulations, performed with refined force fields, specifically parametrized for the cyanide ions under investigation. The information gained about the solute-solvent interactions is then validated through the successful comparison of computed and measured waiting-time-dependent 2D IR spectra. The vibrational patterns resulting from 2D IR measurements were rationalized in terms of the interaction between the ion and the neighboring water molecules described by simulation. It was found that, within the first solvation sphere, the stronger interactions of the solvent with the ferro species are responsible for a delay in the relaxation dynamics, which becomes more and more evident on longer time scales.

In this study we show how deuterium magic-angle spinning NMR spectroscopy can be used to investigate the adsorption-desorption kinetics of molecules in solution at surface-liquid interfaces. An aqueous solution of deuterium-labeled tetraalanine is inserted in the pores of MCM-41 mesoporous material, and its 2H MAS NMR spectrum is measured as a function of temperature and fraction of filling of the pores. Prior to this study, the different types of water in MCM-41 are characterized as a function of water loading of the pores. Analysis of 2H MAS sideband line shapes enabled the determination of the adsorption and desorption rates and the activation energies of desorption.

Conformational properties of small, flexible peptides are a matter of ongoing interest since they can be considered as models for unfolded proteins. However, the investigation of the conformations of small peptides is challenging as they are ensembles of rapidly interconverting conformers; moreover, the different methods used are prone to different approximations and errors. In order to obtain more reliable results, it is prudent to combine different techniques; here, molecular dynamics (MD) simulations together with nuclear magnetic resonance (NMR), Fourier transform IR (FTIR), polarized Raman, and vibrational circular dichroism (VCD) measurements were used to study the conformational propensity of phenylalanine in the tripeptides AFA and GFG, motivated by the relevance of phenylalanine for the self-aggregation of peptides. The results of this analysis indicate that the F residue predominantly populates the beta-strand (beta) and polyproline II (PPII) conformations in both AFA and GFG. However, while phenylalanine exhibits a propensity for beta-strand conformations in GFG (0.40 < or = beta population < or = 0.69 and 0.29 < or = PPII population < or = 0.42), the substitution of terminal glycines with alanine residues induces a higher population of PPII (0.31< or = beta population < or = 0.50 and 0.37 < or = PPII population < or = 0.57).

The reorientation of TEMPO spin probe in semicrystalline poly(dimethylsiloxane) (PDMS) is investigated in the temperature range from the glassy region (below 147 K) up to the melt (above about 230 K) by high-field electron paramagnetic resonance (HF-EPR) spectroscopy at two different Larmor frequencies (190 and 285 GHz). The spin probe is confined in the disordered phase. Accurate numerical simulations evidence that the spin probe undergoes activated jump reorientation overcoming an exponential distribution of barrier heightscharacteristic of highly constrained systemsand resulting in a power-law distribution of the reorientation times. Below 180 K the spin probe is coupled to local relaxations and does not sense the glass transition. A strong narrowing of the distribution of the reorientation times and a sudden drop of the mean value are observed at ≃213 K, above the onset of the melting at ≃209 K. Strikingly, it is found that the faster fraction of the spin probes does not sense the melting and couples to the segmental motion of the bulk amorphous PDMS from about 200 K onward. Our findings support the conclusion that the faster and the slower TEMPO molecules are located in (or very close to) the mobile (MAF) and the rigid (RAF) amorphous fractions of PDMS, respectively. The results suggest that MAF is negligible close to the glass transition but it is present above about 200 K, whereas RAF at about 211 K is reduced to about 8% and softens above 213 K, well below the melting transition (≃230 K). Similarities between the disordered phase of semicrystalline PDMS and the PDMS layers in poly(styrene)–PDMS diblock are discussed.

Hydrophilic colloids (PSS-[Ln2(TCAi)2] and PSS-[LnCAi], where i = 1, 2, or 3 and Ln = Gd or Tb) were prepared by precipitation of Gd­(III) or Tb­(III) complexes with tetrathiacalix[4]­arenes (TCAi) and calix[4]­arenes bearing two 1,3-diketone groups (CAi) from dimethylformamide to an aqueous solution of poly­(sodium 4-styrenesulfonate) (PSS). Dynamic light scattering and transmission electron microscopy demonstrated the formation of nanoparticles coated by the polymer. Luminescence decay measurements on Tb­(III)-based colloids allowed hydration numbers of 2 and 4 per metal ion to be determined for PSS-[Ln2(TCAi)2] and PSS-[LnCAi] samples, respectively. Longitudinal and transverse water proton relaxivity values measured at 20.8 MHz were remarkably high for the PSS-[GdCAi] colloids but unexpectedly low for the PSS-[Gd2(TCAi)2] ones. 1H fast field cycling nuclear magnetic resonance relaxometry was applied to shed light on the origin of the different relaxation enhancement in the investigated systems. Extremely slow exchange with the bulk of water molecules coordinated to Gd­(III) and the scarce accessibility of Gd­(III) sites to water were highlighted as the main causes of limited relaxivity.

The (1)H NMR spectra of two isotopomers of tetraalanine deuterated on the two external methyl groups and on the two internal ones, respectively, were recorded in the lyotropic solvent cesium pentadecafluorooctanoate (CsPFO)/water. Eight dipolar couplings could be estimated from the spectra. The set of dipolar couplings was fitted assuming that one rigid conformer is present. Of the four major conformers considered, selected on the basis of theoretical calculations, the one characterized by the two couples of internal dihedral angles in the Ramachandran region of PPII resulted to be the only one to fit the set of couplings within experimental error. The data indicate that the molecule is oriented with the long molecular axis tilted with respect to the surface of the micelles formed by CsPFO.

Films made of poly(vinyl butyral) (PVB) and antimony-doped tin oxide (ATO) nanoparticles (NPs), both uncoated and surface-modified with an alkoxysilane, were prepared by solution casting at filler volume fractions ranging from 0.08% to 4.5%. The films were characterized by standard techniques including transmission electron microscopy, thermogravimetric analysis and differential scanning calorimetry (DSC). In the polymeric matrix, the primary NPs (diameter ~10 nm) aggregate exhibiting different morphologies depending on the presence of the surface coating. Coated ATO NPs form spherical particles (with a diameter of 300–500 nm), whereas more elongated fractal structures (with a thickness of ~250 nm and length of tens of micrometers) are formed by uncoated NPs. The fraction of the polymer interacting with the NPs is always negligible. In agreement with this finding, DSC data did not reveal any rigid interface and 1H time domain nuclear magnetic resonance (NMR) and fast field-cycling NMR did not show significant differences in polymer dynamics among the different samples. The ultraviolet-visible-near infrared (UV-Vis-NIR) transmittance of the films decreased compared to pure PVB, especially in the NIR range. The solar direct transmittance and the light transmittance were extracted from the spectra according to CEN EN 410/2011 in order to test the performance of our films as plastic layers in laminated glass for glazing.